Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox4Q06831 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sox4Q06831 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Sox4Q06831 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox4Q06831 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.43□□□□□ -0.42
Sox4Q06831 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox4Q06831 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox4Q06831 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sox4Q06831 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Sox4Q06831 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sox4Q06831 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox4Q06831 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.43□□□□□ -0.42
Sox4Q06831 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Sox4Q06831 Gm13875-201ENSMUST00000120162 282 ntBASIC12.43□□□□□ -0.42
Sox4Q06831 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.43□□□□□ -0.42
Sox4Q06831 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sox4Q06831 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.43□□□□□ -0.42
Sox4Q06831 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.43□□□□□ -0.42
Sox4Q06831 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.43□□□□□ -0.42
Sox4Q06831 Gm2991-201ENSMUST00000173338 480 ntBASIC12.43□□□□□ -0.42
Sox4Q06831 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.43□□□□□ -0.42
Sox4Q06831 Morn2-202ENSMUST00000227729 656 ntBASIC12.43□□□□□ -0.42
Sox4Q06831 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox4Q06831 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox4Q06831 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox4Q06831 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox4Q06831 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Sox4Q06831 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox4Q06831 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Sox4Q06831 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox4Q06831 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox4Q06831 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox4Q06831 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.43□□□□□ -0.42
Sox4Q06831 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Sox4Q06831 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Sox4Q06831 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sox4Q06831 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sox4Q06831 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.43□□□□□ -0.42
Sox4Q06831 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sox4Q06831 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox4Q06831 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox4Q06831 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sox4Q06831 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox4Q06831 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox4Q06831 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sox4Q06831 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox4Q06831 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox4Q06831 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Sox4Q06831 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox4Q06831 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox4Q06831 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Sox4Q06831 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox4Q06831 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox4Q06831 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox4Q06831 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Sox4Q06831 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Sox4Q06831 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Sox4Q06831 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Sox4Q06831 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Sox4Q06831 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Sox4Q06831 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.42□□□□□ -0.42
Sox4Q06831 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.42□□□□□ -0.42
Sox4Q06831 Gm14723-201ENSMUST00000118686 215 ntBASIC12.42□□□□□ -0.42
Sox4Q06831 Gm13736-201ENSMUST00000119272 253 ntBASIC12.42□□□□□ -0.42
Sox4Q06831 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sox4Q06831 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.42□□□□□ -0.42
Sox4Q06831 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Sox4Q06831 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox4Q06831 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.42□□□□□ -0.42
Sox4Q06831 Gm2546-201ENSMUST00000182630 991 ntBASIC12.42□□□□□ -0.42
Sox4Q06831 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.42□□□□□ -0.42
Sox4Q06831 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.42□□□□□ -0.42
Sox4Q06831 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.42□□□□□ -0.42
Sox4Q06831 Gm38266-201ENSMUST00000194931 421 ntBASIC12.42□□□□□ -0.42
Sox4Q06831 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.42□□□□□ -0.42
Sox4Q06831 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.42□□□□□ -0.42
Sox4Q06831 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sox4Q06831 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Sox4Q06831 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.42□□□□□ -0.42
Sox4Q06831 Cts7-204ENSMUST00000225321 1257 ntBASIC12.42□□□□□ -0.42
Sox4Q06831 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Sox4Q06831 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Sox4Q06831 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.42□□□□□ -0.42
Sox4Q06831 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox4Q06831 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sox4Q06831 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox4Q06831 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox4Q06831 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.42□□□□□ -0.42
Sox4Q06831 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Sox4Q06831 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox4Q06831 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.42□□□□□ -0.42
Sox4Q06831 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.42□□□□□ -0.42
Sox4Q06831 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox4Q06831 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.42□□□□□ -0.42
Sox4Q06831 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox4Q06831 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.42□□□□□ -0.42
Sox4Q06831 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox4Q06831 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.41□□□□□ -0.42
Sox4Q06831 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox4Q06831 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms