Protein–RNA interactions for Protein: Q04886

Sox8, Transcription factor SOX-8, mousemouse

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox8Q04886 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox8Q04886 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox8Q04886 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox8Q04886 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox8Q04886 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Sox8Q04886 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox8Q04886 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox8Q04886 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox8Q04886 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.32□□□□□ -0.28
Sox8Q04886 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox8Q04886 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.32□□□□□ -0.28
Sox8Q04886 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox8Q04886 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox8Q04886 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox8Q04886 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox8Q04886 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox8Q04886 Mir877-201ENSMUST00000104738 85 ntBASIC13.32□□□□□ -0.28
Sox8Q04886 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox8Q04886 Rmrp-201ENSMUST00000157463 271 ntBASIC13.32□□□□□ -0.28
Sox8Q04886 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.32□□□□□ -0.28
Sox8Q04886 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox8Q04886 Gm27023-201ENSMUST00000182372 285 ntBASIC13.32□□□□□ -0.28
Sox8Q04886 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.32□□□□□ -0.28
Sox8Q04886 Gm8712-201ENSMUST00000221090 701 ntBASIC13.32□□□□□ -0.28
Sox8Q04886 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.32□□□□□ -0.28
Sox8Q04886 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.32□□□□□ -0.28
Sox8Q04886 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox8Q04886 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox8Q04886 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Sox8Q04886 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.32□□□□□ -0.28
Sox8Q04886 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox8Q04886 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Sox8Q04886 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.32□□□□□ -0.28
Sox8Q04886 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox8Q04886 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox8Q04886 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox8Q04886 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.32□□□□□ -0.28
Sox8Q04886 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox8Q04886 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox8Q04886 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox8Q04886 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox8Q04886 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox8Q04886 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox8Q04886 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Sox8Q04886 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox8Q04886 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox8Q04886 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox8Q04886 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox8Q04886 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox8Q04886 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox8Q04886 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.31□□□□□ -0.28
Sox8Q04886 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox8Q04886 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Sox8Q04886 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox8Q04886 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox8Q04886 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox8Q04886 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox8Q04886 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox8Q04886 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox8Q04886 Gm12715-201ENSMUST00000121430 1128 ntBASIC13.31□□□□□ -0.28
Sox8Q04886 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox8Q04886 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox8Q04886 Gm18056-201ENSMUST00000207670 568 ntBASIC13.31□□□□□ -0.28
Sox8Q04886 Gm18061-201ENSMUST00000208350 562 ntBASIC13.31□□□□□ -0.28
Sox8Q04886 Gm18063-201ENSMUST00000208529 568 ntBASIC13.31□□□□□ -0.28
Sox8Q04886 Gm18052-201ENSMUST00000208750 559 ntBASIC13.31□□□□□ -0.28
Sox8Q04886 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox8Q04886 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox8Q04886 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.31□□□□□ -0.28
Sox8Q04886 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Sox8Q04886 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox8Q04886 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox8Q04886 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Sox8Q04886 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox8Q04886 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox8Q04886 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox8Q04886 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox8Q04886 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox8Q04886 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox8Q04886 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox8Q04886 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox8Q04886 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.3□□□□□ -0.28
Sox8Q04886 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Sox8Q04886 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Sox8Q04886 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Sox8Q04886 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox8Q04886 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox8Q04886 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox8Q04886 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox8Q04886 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox8Q04886 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox8Q04886 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.3□□□□□ -0.28
Sox8Q04886 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox8Q04886 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox8Q04886 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Sox8Q04886 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Sox8Q04886 Gm15547-201ENSMUST00000122152 333 ntBASIC13.3□□□□□ -0.28
Sox8Q04886 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13.3□□□□□ -0.28
Sox8Q04886 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox8Q04886 Gm13570-201ENSMUST00000140763 309 ntBASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms