Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gabpb1Q00420 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gabpb1Q00420 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gabpb1Q00420 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.83□□□□□ -0.36
Gabpb1Q00420 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.83□□□□□ -0.36
Gabpb1Q00420 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.83□□□□□ -0.36
Gabpb1Q00420 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Gabpb1Q00420 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gabpb1Q00420 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Gabpb1Q00420 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.83□□□□□ -0.36
Gabpb1Q00420 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gabpb1Q00420 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Gabpb1Q00420 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gabpb1Q00420 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gabpb1Q00420 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Gabpb1Q00420 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Gabpb1Q00420 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Gabpb1Q00420 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gabpb1Q00420 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Gabpb1Q00420 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.83□□□□□ -0.36
Gabpb1Q00420 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gabpb1Q00420 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gabpb1Q00420 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gabpb1Q00420 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gabpb1Q00420 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.83□□□□□ -0.36
Gabpb1Q00420 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Gabpb1Q00420 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.83□□□□□ -0.36
Gabpb1Q00420 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.82□□□□□ -0.36
Gabpb1Q00420 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Gabpb1Q00420 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabpb1Q00420 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabpb1Q00420 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabpb1Q00420 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gabpb1Q00420 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabpb1Q00420 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Gabpb1Q00420 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabpb1Q00420 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabpb1Q00420 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabpb1Q00420 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.82□□□□□ -0.36
Gabpb1Q00420 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabpb1Q00420 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabpb1Q00420 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabpb1Q00420 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabpb1Q00420 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabpb1Q00420 Gm24231-201ENSMUST00000104315 133 ntBASIC12.82□□□□□ -0.36
Gabpb1Q00420 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.82□□□□□ -0.36
Gabpb1Q00420 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabpb1Q00420 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Gabpb1Q00420 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gabpb1Q00420 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gabpb1Q00420 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.82□□□□□ -0.36
Gabpb1Q00420 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.82□□□□□ -0.36
Gabpb1Q00420 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gabpb1Q00420 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.82□□□□□ -0.36
Gabpb1Q00420 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Gabpb1Q00420 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.82□□□□□ -0.36
Gabpb1Q00420 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabpb1Q00420 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabpb1Q00420 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabpb1Q00420 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabpb1Q00420 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabpb1Q00420 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabpb1Q00420 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabpb1Q00420 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabpb1Q00420 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabpb1Q00420 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gabpb1Q00420 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gabpb1Q00420 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabpb1Q00420 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabpb1Q00420 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.82□□□□□ -0.36
Gabpb1Q00420 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabpb1Q00420 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabpb1Q00420 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabpb1Q00420 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabpb1Q00420 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gabpb1Q00420 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabpb1Q00420 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabpb1Q00420 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gabpb1Q00420 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gabpb1Q00420 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gabpb1Q00420 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gabpb1Q00420 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Gabpb1Q00420 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gabpb1Q00420 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gabpb1Q00420 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.81□□□□□ -0.36
Gabpb1Q00420 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.81□□□□□ -0.36
Gabpb1Q00420 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gabpb1Q00420 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gabpb1Q00420 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.81□□□□□ -0.36
Gabpb1Q00420 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Gabpb1Q00420 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.81□□□□□ -0.36
Gabpb1Q00420 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.81□□□□□ -0.36
Gabpb1Q00420 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.81□□□□□ -0.36
Gabpb1Q00420 Rmrp-201ENSMUST00000157463 271 ntBASIC12.81□□□□□ -0.36
Gabpb1Q00420 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.81□□□□□ -0.36
Gabpb1Q00420 Gm6266-201ENSMUST00000203844 806 ntBASIC12.81□□□□□ -0.36
Gabpb1Q00420 Gm40466-201ENSMUST00000212174 422 ntBASIC12.81□□□□□ -0.36
Gabpb1Q00420 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gabpb1Q00420 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.81□□□□□ -0.36
Gabpb1Q00420 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms