Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lig3P97386 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lig3P97386 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lig3P97386 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Lig3P97386 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lig3P97386 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lig3P97386 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.84□□□□□ -0.19
Lig3P97386 Gm45011-201ENSMUST00000207620 2297 ntBASIC13.84□□□□□ -0.19
Lig3P97386 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lig3P97386 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lig3P97386 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13.84□□□□□ -0.19
Lig3P97386 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lig3P97386 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lig3P97386 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lig3P97386 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lig3P97386 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lig3P97386 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lig3P97386 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lig3P97386 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lig3P97386 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC13.83□□□□□ -0.19
Lig3P97386 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.83□□□□□ -0.19
Lig3P97386 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.83□□□□□ -0.19
Lig3P97386 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Lig3P97386 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Lig3P97386 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Lig3P97386 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC13.83□□□□□ -0.19
Lig3P97386 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lig3P97386 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC13.83□□□□□ -0.2
Lig3P97386 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lig3P97386 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.83□□□□□ -0.2
Lig3P97386 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lig3P97386 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Lig3P97386 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lig3P97386 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lig3P97386 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lig3P97386 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lig3P97386 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lig3P97386 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lig3P97386 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lig3P97386 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC13.83□□□□□ -0.2
Lig3P97386 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lig3P97386 B9d1os-201ENSMUST00000137010 674 ntBASIC13.83□□□□□ -0.2
Lig3P97386 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lig3P97386 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Lig3P97386 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
Lig3P97386 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC13.83□□□□□ -0.2
Lig3P97386 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lig3P97386 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lig3P97386 Gm16372-201ENSMUST00000073088 450 ntBASIC13.83□□□□□ -0.2
Lig3P97386 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lig3P97386 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lig3P97386 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC13.83□□□□□ -0.2
Lig3P97386 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lig3P97386 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Lig3P97386 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lig3P97386 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lig3P97386 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC13.83□□□□□ -0.2
Lig3P97386 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lig3P97386 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lig3P97386 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lig3P97386 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.83□□□□□ -0.2
Lig3P97386 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Lig3P97386 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lig3P97386 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lig3P97386 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lig3P97386 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lig3P97386 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lig3P97386 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lig3P97386 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lig3P97386 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Lig3P97386 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Lig3P97386 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lig3P97386 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lig3P97386 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lig3P97386 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lig3P97386 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lig3P97386 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.82□□□□□ -0.2
Lig3P97386 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lig3P97386 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lig3P97386 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.82□□□□□ -0.2
Lig3P97386 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lig3P97386 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.82□□□□□ -0.2
Lig3P97386 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Lig3P97386 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lig3P97386 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lig3P97386 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lig3P97386 Gm38144-201ENSMUST00000192790 465 ntBASIC13.82□□□□□ -0.2
Lig3P97386 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lig3P97386 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.82□□□□□ -0.2
Lig3P97386 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.82□□□□□ -0.2
Lig3P97386 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lig3P97386 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lig3P97386 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lig3P97386 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lig3P97386 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lig3P97386 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lig3P97386 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lig3P97386 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lig3P97386 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lig3P97386 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms