Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43cP86449 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43cP86449 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43cP86449 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43cP86449 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trim43cP86449 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.73□□□□□ -0.21
Trim43cP86449 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.73□□□□□ -0.21
Trim43cP86449 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.73□□□□□ -0.21
Trim43cP86449 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43cP86449 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43cP86449 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trim43cP86449 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.73□□□□□ -0.21
Trim43cP86449 Gm9630-201ENSMUST00000178304 885 ntBASIC13.73□□□□□ -0.21
Trim43cP86449 Gm43118-201ENSMUST00000199149 775 ntBASIC13.73□□□□□ -0.21
Trim43cP86449 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.73□□□□□ -0.21
Trim43cP86449 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.73□□□□□ -0.21
Trim43cP86449 Gm45930-201ENSMUST00000221330 292 ntBASIC13.73□□□□□ -0.21
Trim43cP86449 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.73□□□□□ -0.21
Trim43cP86449 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trim43cP86449 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trim43cP86449 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43cP86449 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43cP86449 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.73□□□□□ -0.21
Trim43cP86449 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43cP86449 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.73□□□□□ -0.21
Trim43cP86449 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43cP86449 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43cP86449 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43cP86449 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trim43cP86449 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43cP86449 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43cP86449 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43cP86449 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trim43cP86449 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43cP86449 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.73□□□□□ -0.21
Trim43cP86449 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43cP86449 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43cP86449 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43cP86449 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43cP86449 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43cP86449 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trim43cP86449 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43cP86449 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43cP86449 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43cP86449 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trim43cP86449 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43cP86449 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43cP86449 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43cP86449 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43cP86449 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43cP86449 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43cP86449 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43cP86449 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.72□□□□□ -0.21
Trim43cP86449 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43cP86449 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43cP86449 Gm9022-201ENSMUST00000182482 992 ntBASIC13.72□□□□□ -0.21
Trim43cP86449 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Trim43cP86449 Gm38002-201ENSMUST00000193255 180 ntBASIC13.72□□□□□ -0.21
Trim43cP86449 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.72□□□□□ -0.21
Trim43cP86449 Gm18062-201ENSMUST00000208020 547 ntBASIC13.72□□□□□ -0.21
Trim43cP86449 Gm18055-201ENSMUST00000208254 547 ntBASIC13.72□□□□□ -0.21
Trim43cP86449 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.72□□□□□ -0.21
Trim43cP86449 Gm5186-201ENSMUST00000218781 920 ntBASIC13.72□□□□□ -0.21
Trim43cP86449 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.72□□□□□ -0.21
Trim43cP86449 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.72□□□□□ -0.21
Trim43cP86449 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43cP86449 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43cP86449 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trim43cP86449 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43cP86449 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43cP86449 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trim43cP86449 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43cP86449 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43cP86449 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.72□□□□□ -0.21
Trim43cP86449 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43cP86449 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43cP86449 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.72□□□□□ -0.21
Trim43cP86449 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
Trim43cP86449 Rab3c-202ENSMUST00000223922 2398 ntBASIC13.72□□□□□ -0.21
Trim43cP86449 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43cP86449 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.72□□□□□ -0.21
Trim43cP86449 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43cP86449 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43cP86449 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43cP86449 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43cP86449 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43cP86449 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43cP86449 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC13.71□□□□□ -0.21
Trim43cP86449 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43cP86449 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43cP86449 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43cP86449 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43cP86449 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43cP86449 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
Trim43cP86449 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43cP86449 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43cP86449 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43cP86449 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43cP86449 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.71□□□□□ -0.21
Trim43cP86449 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms