Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SgcbP82349 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.3□□□□□ -0.6
SgcbP82349 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.3□□□□□ -0.6
SgcbP82349 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SgcbP82349 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SgcbP82349 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
SgcbP82349 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.3□□□□□ -0.6
SgcbP82349 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SgcbP82349 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
SgcbP82349 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SgcbP82349 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SgcbP82349 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SgcbP82349 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SgcbP82349 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SgcbP82349 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SgcbP82349 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.3□□□□□ -0.6
SgcbP82349 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SgcbP82349 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SgcbP82349 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
SgcbP82349 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
SgcbP82349 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SgcbP82349 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SgcbP82349 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
SgcbP82349 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SgcbP82349 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SgcbP82349 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
SgcbP82349 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SgcbP82349 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
SgcbP82349 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SgcbP82349 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SgcbP82349 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SgcbP82349 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SgcbP82349 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SgcbP82349 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.29□□□□□ -0.6
SgcbP82349 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.29□□□□□ -0.6
SgcbP82349 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SgcbP82349 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.29□□□□□ -0.6
SgcbP82349 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
SgcbP82349 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.29□□□□□ -0.6
SgcbP82349 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SgcbP82349 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SgcbP82349 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SgcbP82349 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
SgcbP82349 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
SgcbP82349 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SgcbP82349 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SgcbP82349 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SgcbP82349 Gm22885-201ENSMUST00000157410 107 ntBASIC11.29□□□□□ -0.6
SgcbP82349 Gm37489-201ENSMUST00000191883 159 ntBASIC11.29□□□□□ -0.6
SgcbP82349 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.29□□□□□ -0.6
SgcbP82349 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.29□□□□□ -0.6
SgcbP82349 Gm18935-201ENSMUST00000212692 664 ntBASIC11.29□□□□□ -0.6
SgcbP82349 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC11.29□□□□□ -0.6
SgcbP82349 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SgcbP82349 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
SgcbP82349 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
SgcbP82349 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SgcbP82349 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SgcbP82349 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SgcbP82349 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SgcbP82349 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SgcbP82349 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SgcbP82349 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SgcbP82349 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SgcbP82349 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SgcbP82349 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SgcbP82349 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC11.29□□□□□ -0.6
SgcbP82349 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SgcbP82349 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SgcbP82349 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SgcbP82349 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
SgcbP82349 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.29□□□□□ -0.6
SgcbP82349 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
SgcbP82349 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SgcbP82349 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SgcbP82349 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SgcbP82349 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SgcbP82349 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SgcbP82349 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.28□□□□□ -0.6
SgcbP82349 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
SgcbP82349 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcbP82349 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcbP82349 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.28□□□□□ -0.6
SgcbP82349 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SgcbP82349 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SgcbP82349 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcbP82349 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcbP82349 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcbP82349 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcbP82349 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcbP82349 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.28□□□□□ -0.6
SgcbP82349 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcbP82349 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
SgcbP82349 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.28□□□□□ -0.6
SgcbP82349 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.28□□□□□ -0.6
SgcbP82349 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.28□□□□□ -0.6
SgcbP82349 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SgcbP82349 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcbP82349 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.28□□□□□ -0.6
SgcbP82349 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms