Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Cks1bP61025 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1bP61025 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1bP61025 Phc1-203ENSMUST00000112600 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1bP61025 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1bP61025 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Cks1bP61025 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1bP61025 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC9.04□□□□□ -0.96
Cks1bP61025 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC9.04□□□□□ -0.96
Cks1bP61025 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC9.04□□□□□ -0.96
Cks1bP61025 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1bP61025 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Cks1bP61025 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Cks1bP61025 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1bP61025 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC9.04□□□□□ -0.96
Cks1bP61025 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1bP61025 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC9.04□□□□□ -0.96
Cks1bP61025 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1bP61025 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1bP61025 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1bP61025 Gm37613-201ENSMUST00000195677 3580 ntBASIC9.04□□□□□ -0.96
Cks1bP61025 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1bP61025 Gm24543-201ENSMUST00000103867 82 ntBASIC9.04□□□□□ -0.96
Cks1bP61025 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC9.04□□□□□ -0.96
Cks1bP61025 Gm8410-201ENSMUST00000117225 605 ntBASIC9.04□□□□□ -0.96
Cks1bP61025 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1bP61025 Gm15460-201ENSMUST00000118147 391 ntBASIC9.04□□□□□ -0.96
Cks1bP61025 Gm14494-201ENSMUST00000118786 435 ntBASIC9.04□□□□□ -0.96
Cks1bP61025 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC9.04□□□□□ -0.96
Cks1bP61025 Gm6283-201ENSMUST00000182369 1000 ntBASIC9.04□□□□□ -0.96
Cks1bP61025 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1bP61025 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1bP61025 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1bP61025 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC9.04□□□□□ -0.96
Cks1bP61025 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC9.04□□□□□ -0.96
Cks1bP61025 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1bP61025 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC9.04□□□□□ -0.96
Cks1bP61025 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1bP61025 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1bP61025 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Cks1bP61025 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1bP61025 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1bP61025 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1bP61025 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1bP61025 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1bP61025 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1bP61025 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1bP61025 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1bP61025 Gm43984-201ENSMUST00000204572 2864 ntBASIC9.04□□□□□ -0.96
Cks1bP61025 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Cks1bP61025 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Cks1bP61025 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1bP61025 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1bP61025 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC9.04□□□□□ -0.96
Cks1bP61025 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC9.04□□□□□ -0.96
Cks1bP61025 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1bP61025 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1bP61025 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1bP61025 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1bP61025 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1bP61025 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1bP61025 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC9.04□□□□□ -0.96
Cks1bP61025 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1bP61025 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1bP61025 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC9.04□□□□□ -0.96
Cks1bP61025 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1bP61025 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1bP61025 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1bP61025 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1bP61025 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1bP61025 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC9.03□□□□□ -0.96
Cks1bP61025 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1bP61025 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1bP61025 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1bP61025 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1bP61025 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1bP61025 Gm13332-201ENSMUST00000120451 1398 ntBASIC9.03□□□□□ -0.96
Cks1bP61025 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1bP61025 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1bP61025 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Cks1bP61025 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1bP61025 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Cks1bP61025 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1bP61025 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Cks1bP61025 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1bP61025 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1bP61025 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1bP61025 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1bP61025 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1bP61025 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Cks1bP61025 Gm13015-201ENSMUST00000118674 204 ntBASIC9.03□□□□□ -0.96
Cks1bP61025 Gm15653-201ENSMUST00000119247 907 ntBASIC9.03□□□□□ -0.96
Cks1bP61025 Gm15393-201ENSMUST00000120499 219 ntBASIC9.03□□□□□ -0.96
Cks1bP61025 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC9.03□□□□□ -0.96
Cks1bP61025 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC9.03□□□□□ -0.96
Cks1bP61025 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC9.03□□□□□ -0.96
Cks1bP61025 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC9.03□□□□□ -0.96
Cks1bP61025 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC9.03□□□□□ -0.96
Cks1bP61025 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC9.03□□□□□ -0.96
Cks1bP61025 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms