Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lim2P56563 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.63□□□□□ -0.39
Lim2P56563 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lim2P56563 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Lim2P56563 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lim2P56563 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lim2P56563 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Lim2P56563 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lim2P56563 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.63□□□□□ -0.39
Lim2P56563 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.63□□□□□ -0.39
Lim2P56563 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.63□□□□□ -0.39
Lim2P56563 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.63□□□□□ -0.39
Lim2P56563 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lim2P56563 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lim2P56563 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.63□□□□□ -0.39
Lim2P56563 Gm45331-201ENSMUST00000209868 554 ntBASIC12.63□□□□□ -0.39
Lim2P56563 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.63□□□□□ -0.39
Lim2P56563 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lim2P56563 Gm24526-201ENSMUST00000082921 158 ntBASIC12.63□□□□□ -0.39
Lim2P56563 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Lim2P56563 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Lim2P56563 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lim2P56563 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lim2P56563 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lim2P56563 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lim2P56563 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lim2P56563 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lim2P56563 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lim2P56563 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lim2P56563 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lim2P56563 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lim2P56563 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lim2P56563 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lim2P56563 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lim2P56563 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lim2P56563 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lim2P56563 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lim2P56563 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lim2P56563 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lim2P56563 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lim2P56563 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lim2P56563 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lim2P56563 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lim2P56563 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Lim2P56563 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lim2P56563 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lim2P56563 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lim2P56563 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lim2P56563 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lim2P56563 Mir1247-201ENSMUST00000116706 82 ntBASIC12.62□□□□□ -0.39
Lim2P56563 Gm13492-201ENSMUST00000119772 665 ntBASIC12.62□□□□□ -0.39
Lim2P56563 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.62□□□□□ -0.39
Lim2P56563 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lim2P56563 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lim2P56563 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lim2P56563 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.62□□□□□ -0.39
Lim2P56563 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.62□□□□□ -0.39
Lim2P56563 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lim2P56563 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.62□□□□□ -0.39
Lim2P56563 Gm5904-201ENSMUST00000210286 865 ntBASIC12.62□□□□□ -0.39
Lim2P56563 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.62□□□□□ -0.39
Lim2P56563 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.62□□□□□ -0.39
Lim2P56563 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lim2P56563 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.62□□□□□ -0.39
Lim2P56563 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lim2P56563 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Lim2P56563 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lim2P56563 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lim2P56563 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lim2P56563 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lim2P56563 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lim2P56563 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.62□□□□□ -0.39
Lim2P56563 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lim2P56563 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Lim2P56563 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lim2P56563 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.62□□□□□ -0.39
Lim2P56563 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Lim2P56563 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Lim2P56563 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lim2P56563 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lim2P56563 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lim2P56563 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lim2P56563 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Lim2P56563 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.61□□□□□ -0.39
Lim2P56563 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lim2P56563 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lim2P56563 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.61□□□□□ -0.39
Lim2P56563 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.61□□□□□ -0.39
Lim2P56563 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lim2P56563 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lim2P56563 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lim2P56563 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lim2P56563 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lim2P56563 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.61□□□□□ -0.39
Lim2P56563 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.61□□□□□ -0.39
Lim2P56563 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.61□□□□□ -0.39
Lim2P56563 Gm27501-201ENSMUST00000183599 107 ntBASIC12.61□□□□□ -0.39
Lim2P56563 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.61□□□□□ -0.39
Lim2P56563 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.61□□□□□ -0.39
Lim2P56563 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms