Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NrlP54846 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
NrlP54846 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
NrlP54846 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
NrlP54846 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NrlP54846 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NrlP54846 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
NrlP54846 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.46□□□□□ -0.25
NrlP54846 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
NrlP54846 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.46□□□□□ -0.25
NrlP54846 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NrlP54846 AC126444.1-201ENSMUST00000225938 1768 ntBASIC13.46□□□□□ -0.25
NrlP54846 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NrlP54846 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
NrlP54846 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NrlP54846 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NrlP54846 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
NrlP54846 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NrlP54846 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.46□□□□□ -0.25
NrlP54846 Gm42997-202ENSMUST00000200321 985 ntBASIC13.46□□□□□ -0.25
NrlP54846 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NrlP54846 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC13.46□□□□□ -0.25
NrlP54846 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NrlP54846 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.46□□□□□ -0.25
NrlP54846 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.46□□□□□ -0.25
NrlP54846 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC13.46□□□□□ -0.25
NrlP54846 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.25
NrlP54846 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NrlP54846 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NrlP54846 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NrlP54846 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NrlP54846 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
NrlP54846 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
NrlP54846 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
NrlP54846 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
NrlP54846 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NrlP54846 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NrlP54846 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NrlP54846 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NrlP54846 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NrlP54846 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NrlP54846 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NrlP54846 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
NrlP54846 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NrlP54846 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NrlP54846 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NrlP54846 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NrlP54846 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NrlP54846 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
NrlP54846 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NrlP54846 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NrlP54846 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.45□□□□□ -0.26
NrlP54846 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC13.45□□□□□ -0.26
NrlP54846 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NrlP54846 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.45□□□□□ -0.26
NrlP54846 Gm14921-201ENSMUST00000118643 908 ntBASIC13.45□□□□□ -0.26
NrlP54846 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC13.45□□□□□ -0.26
NrlP54846 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NrlP54846 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.45□□□□□ -0.26
NrlP54846 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.45□□□□□ -0.26
NrlP54846 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NrlP54846 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NrlP54846 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.45□□□□□ -0.26
NrlP54846 Gm34767-201ENSMUST00000191813 1062 ntBASIC13.45□□□□□ -0.26
NrlP54846 Gm44651-201ENSMUST00000207343 372 ntBASIC13.45□□□□□ -0.26
NrlP54846 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC13.45□□□□□ -0.26
NrlP54846 Gm8385-201ENSMUST00000058999 643 ntBASIC13.45□□□□□ -0.26
NrlP54846 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NrlP54846 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NrlP54846 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
NrlP54846 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.45□□□□□ -0.26
NrlP54846 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NrlP54846 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NrlP54846 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NrlP54846 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NrlP54846 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.45□□□□□ -0.26
NrlP54846 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NrlP54846 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NrlP54846 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NrlP54846 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
NrlP54846 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
NrlP54846 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC13.44□□□□□ -0.26
NrlP54846 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NrlP54846 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
NrlP54846 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NrlP54846 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
NrlP54846 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.44□□□□□ -0.26
NrlP54846 Gm43908-201ENSMUST00000205074 1472 ntBASIC13.44□□□□□ -0.26
NrlP54846 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NrlP54846 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
NrlP54846 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NrlP54846 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
NrlP54846 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NrlP54846 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NrlP54846 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NrlP54846 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.44□□□□□ -0.26
NrlP54846 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC13.44□□□□□ -0.26
NrlP54846 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.44□□□□□ -0.26
NrlP54846 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
NrlP54846 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms