Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Atxn1P54254 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Atxn1P54254 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Atxn1P54254 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Atxn1P54254 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Atxn1P54254 Gm9555-201ENSMUST00000200908 583 ntBASIC12.57□□□□□ -0.4
Atxn1P54254 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.57□□□□□ -0.4
Atxn1P54254 Gm8285-201ENSMUST00000208293 759 ntBASIC12.57□□□□□ -0.4
Atxn1P54254 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Atxn1P54254 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.57□□□□□ -0.4
Atxn1P54254 Gm32025-201ENSMUST00000217960 307 ntBASIC12.57□□□□□ -0.4
Atxn1P54254 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Atxn1P54254 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atxn1P54254 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atxn1P54254 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Atxn1P54254 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Atxn1P54254 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atxn1P54254 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atxn1P54254 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atxn1P54254 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atxn1P54254 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atxn1P54254 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atxn1P54254 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atxn1P54254 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Atxn1P54254 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atxn1P54254 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.57□□□□□ -0.4
Atxn1P54254 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atxn1P54254 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atxn1P54254 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atxn1P54254 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atxn1P54254 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atxn1P54254 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atxn1P54254 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atxn1P54254 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Atxn1P54254 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atxn1P54254 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atxn1P54254 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Atxn1P54254 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atxn1P54254 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atxn1P54254 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atxn1P54254 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.56□□□□□ -0.4
Atxn1P54254 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Atxn1P54254 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Atxn1P54254 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atxn1P54254 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Atxn1P54254 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Atxn1P54254 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Atxn1P54254 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atxn1P54254 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atxn1P54254 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC12.56□□□□□ -0.4
Atxn1P54254 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.56□□□□□ -0.4
Atxn1P54254 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.56□□□□□ -0.4
Atxn1P54254 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Atxn1P54254 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Atxn1P54254 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Atxn1P54254 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.56□□□□□ -0.4
Atxn1P54254 Gm44651-201ENSMUST00000207343 372 ntBASIC12.56□□□□□ -0.4
Atxn1P54254 Gm8913-201ENSMUST00000209491 641 ntBASIC12.56□□□□□ -0.4
Atxn1P54254 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC12.56□□□□□ -0.4
Atxn1P54254 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.56□□□□□ -0.4
Atxn1P54254 AC135469.1-201ENSMUST00000225984 772 ntBASIC12.56□□□□□ -0.4
Atxn1P54254 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Atxn1P54254 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atxn1P54254 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atxn1P54254 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Atxn1P54254 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atxn1P54254 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Atxn1P54254 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atxn1P54254 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atxn1P54254 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Atxn1P54254 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atxn1P54254 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.56□□□□□ -0.4
Atxn1P54254 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Atxn1P54254 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atxn1P54254 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Atxn1P54254 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
Atxn1P54254 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atxn1P54254 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atxn1P54254 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atxn1P54254 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.56□□□□□ -0.4
Atxn1P54254 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Atxn1P54254 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atxn1P54254 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Atxn1P54254 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.56□□□□□ -0.4
Atxn1P54254 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Atxn1P54254 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.55□□□□□ -0.4
Atxn1P54254 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Atxn1P54254 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Atxn1P54254 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Atxn1P54254 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Atxn1P54254 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Atxn1P54254 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.55□□□□□ -0.4
Atxn1P54254 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.55□□□□□ -0.4
Atxn1P54254 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.55□□□□□ -0.4
Atxn1P54254 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Atxn1P54254 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Atxn1P54254 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Atxn1P54254 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Atxn1P54254 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Atxn1P54254 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms