Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fdft1P53798 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Fdft1P53798 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Fdft1P53798 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.64□□□□□ -0.39
Fdft1P53798 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fdft1P53798 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.64□□□□□ -0.39
Fdft1P53798 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.64□□□□□ -0.39
Fdft1P53798 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fdft1P53798 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fdft1P53798 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fdft1P53798 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Fdft1P53798 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fdft1P53798 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Fdft1P53798 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fdft1P53798 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Fdft1P53798 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fdft1P53798 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fdft1P53798 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fdft1P53798 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.63□□□□□ -0.39
Fdft1P53798 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fdft1P53798 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Fdft1P53798 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fdft1P53798 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fdft1P53798 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.63□□□□□ -0.39
Fdft1P53798 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Fdft1P53798 Gm26185-201ENSMUST00000157692 266 ntBASIC12.63□□□□□ -0.39
Fdft1P53798 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.63□□□□□ -0.39
Fdft1P53798 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fdft1P53798 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Fdft1P53798 Gm27847-201ENSMUST00000183711 107 ntBASIC12.63□□□□□ -0.39
Fdft1P53798 Gm27375-201ENSMUST00000183799 107 ntBASIC12.63□□□□□ -0.39
Fdft1P53798 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.63□□□□□ -0.39
Fdft1P53798 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.63□□□□□ -0.39
Fdft1P53798 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.63□□□□□ -0.39
Fdft1P53798 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.63□□□□□ -0.39
Fdft1P53798 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.63□□□□□ -0.39
Fdft1P53798 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.63□□□□□ -0.39
Fdft1P53798 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.63□□□□□ -0.39
Fdft1P53798 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Fdft1P53798 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fdft1P53798 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fdft1P53798 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fdft1P53798 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fdft1P53798 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fdft1P53798 Gm10146-201ENSMUST00000072739 309 ntBASIC12.63□□□□□ -0.39
Fdft1P53798 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Fdft1P53798 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Fdft1P53798 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.63□□□□□ -0.39
Fdft1P53798 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fdft1P53798 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fdft1P53798 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Fdft1P53798 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Fdft1P53798 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Fdft1P53798 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fdft1P53798 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Fdft1P53798 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Fdft1P53798 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.62□□□□□ -0.39
Fdft1P53798 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Fdft1P53798 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Fdft1P53798 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Fdft1P53798 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Fdft1P53798 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Fdft1P53798 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Fdft1P53798 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.62□□□□□ -0.39
Fdft1P53798 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.62□□□□□ -0.39
Fdft1P53798 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Fdft1P53798 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Fdft1P53798 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.62□□□□□ -0.39
Fdft1P53798 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.62□□□□□ -0.39
Fdft1P53798 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Fdft1P53798 Gm12291-201ENSMUST00000121627 311 ntBASIC12.62□□□□□ -0.39
Fdft1P53798 Gm2231-201ENSMUST00000125661 612 ntBASIC12.62□□□□□ -0.39
Fdft1P53798 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.62□□□□□ -0.39
Fdft1P53798 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.62□□□□□ -0.39
Fdft1P53798 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.62□□□□□ -0.39
Fdft1P53798 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Fdft1P53798 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Fdft1P53798 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Fdft1P53798 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Fdft1P53798 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.62□□□□□ -0.39
Fdft1P53798 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Fdft1P53798 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Fdft1P53798 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Fdft1P53798 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Fdft1P53798 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Fdft1P53798 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Fdft1P53798 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Fdft1P53798 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Fdft1P53798 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Fdft1P53798 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Fdft1P53798 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.62□□□□□ -0.39
Fdft1P53798 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Fdft1P53798 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Fdft1P53798 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Fdft1P53798 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Fdft1P53798 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Fdft1P53798 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Fdft1P53798 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Fdft1P53798 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Fdft1P53798 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms