Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-1P50220 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Nkx2-1P50220 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC10.47□□□□□ -0.73
Nkx2-1P50220 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC10.47□□□□□ -0.73
Nkx2-1P50220 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-1P50220 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-1P50220 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-1P50220 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-1P50220 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-1P50220 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC10.47□□□□□ -0.73
Nkx2-1P50220 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Nkx2-1P50220 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-1P50220 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-1P50220 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-1P50220 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-1P50220 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Nkx2-1P50220 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.47□□□□□ -0.73
Nkx2-1P50220 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Nkx2-1P50220 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-1P50220 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-1P50220 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-1P50220 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-1P50220 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-1P50220 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-1P50220 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Nkx2-1P50220 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx2-1P50220 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx2-1P50220 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx2-1P50220 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx2-1P50220 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx2-1P50220 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx2-1P50220 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx2-1P50220 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx2-1P50220 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx2-1P50220 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx2-1P50220 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx2-1P50220 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx2-1P50220 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx2-1P50220 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx2-1P50220 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx2-1P50220 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx2-1P50220 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx2-1P50220 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC10.46□□□□□ -0.73
Nkx2-1P50220 Gm24694-201ENSMUST00000180054 110 ntBASIC10.46□□□□□ -0.73
Nkx2-1P50220 Gm9522-201ENSMUST00000182394 926 ntBASIC10.46□□□□□ -0.73
Nkx2-1P50220 Gm27390-201ENSMUST00000184516 176 ntBASIC10.46□□□□□ -0.73
Nkx2-1P50220 Gm27663-201ENSMUST00000184839 110 ntBASIC10.46□□□□□ -0.73
Nkx2-1P50220 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.46□□□□□ -0.73
Nkx2-1P50220 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC10.46□□□□□ -0.73
Nkx2-1P50220 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx2-1P50220 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx2-1P50220 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nkx2-1P50220 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nkx2-1P50220 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nkx2-1P50220 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nkx2-1P50220 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.74
Nkx2-1P50220 Gm43868-201ENSMUST00000205187 2114 ntBASIC10.46□□□□□ -0.74
Nkx2-1P50220 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nkx2-1P50220 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nkx2-1P50220 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nkx2-1P50220 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nkx2-1P50220 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
Nkx2-1P50220 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nkx2-1P50220 AC122840.1-201ENSMUST00000220915 3334 ntBASIC10.46□□□□□ -0.74
Nkx2-1P50220 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nkx2-1P50220 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Nkx2-1P50220 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nkx2-1P50220 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nkx2-1P50220 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-1P50220 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Nkx2-1P50220 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-1P50220 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-1P50220 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-1P50220 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC10.45□□□□□ -0.74
Nkx2-1P50220 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-1P50220 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-1P50220 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Nkx2-1P50220 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-1P50220 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-1P50220 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-1P50220 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-1P50220 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC10.45□□□□□ -0.74
Nkx2-1P50220 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Nkx2-1P50220 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-1P50220 Gm14057-201ENSMUST00000120631 482 ntBASIC10.45□□□□□ -0.74
Nkx2-1P50220 Gm13813-201ENSMUST00000120998 787 ntBASIC10.45□□□□□ -0.74
Nkx2-1P50220 Gm14719-201ENSMUST00000121891 340 ntBASIC10.45□□□□□ -0.74
Nkx2-1P50220 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-1P50220 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-1P50220 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Nkx2-1P50220 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Nkx2-1P50220 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC10.45□□□□□ -0.74
Nkx2-1P50220 Gm7063-201ENSMUST00000186840 981 ntBASIC10.45□□□□□ -0.74
Nkx2-1P50220 Gm43094-201ENSMUST00000196549 921 ntBASIC10.45□□□□□ -0.74
Nkx2-1P50220 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC10.45□□□□□ -0.74
Nkx2-1P50220 AC132863.2-201ENSMUST00000226643 799 ntBASIC10.45□□□□□ -0.74
Nkx2-1P50220 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-1P50220 Gm26035-201ENSMUST00000083065 308 ntBASIC10.45□□□□□ -0.74
Nkx2-1P50220 Rn7sk-201ENSMUST00000083103 331 ntBASIC10.45□□□□□ -0.74
Nkx2-1P50220 Gm26315-201ENSMUST00000083890 321 ntBASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms