Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox18P43680 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox18P43680 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox18P43680 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox18P43680 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.24□□□□□ -0.45
Sox18P43680 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sox18P43680 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox18P43680 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox18P43680 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox18P43680 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Sox18P43680 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.24□□□□□ -0.45
Sox18P43680 Gm15061-201ENSMUST00000121076 1046 ntBASIC12.24□□□□□ -0.45
Sox18P43680 Gm11978-201ENSMUST00000122315 466 ntBASIC12.24□□□□□ -0.45
Sox18P43680 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sox18P43680 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sox18P43680 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox18P43680 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sox18P43680 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Sox18P43680 Gm22121-201ENSMUST00000175148 54 ntBASIC12.24□□□□□ -0.45
Sox18P43680 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Sox18P43680 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sox18P43680 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.24□□□□□ -0.45
Sox18P43680 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC12.24□□□□□ -0.45
Sox18P43680 Rprl1-202ENSMUST00000198476 238 ntBASIC12.24□□□□□ -0.45
Sox18P43680 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sox18P43680 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.24□□□□□ -0.45
Sox18P43680 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox18P43680 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Sox18P43680 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sox18P43680 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sox18P43680 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sox18P43680 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.24□□□□□ -0.45
Sox18P43680 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox18P43680 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC12.24□□□□□ -0.45
Sox18P43680 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox18P43680 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox18P43680 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox18P43680 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox18P43680 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Sox18P43680 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.24□□□□□ -0.45
Sox18P43680 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox18P43680 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox18P43680 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox18P43680 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox18P43680 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox18P43680 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox18P43680 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox18P43680 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox18P43680 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox18P43680 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox18P43680 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox18P43680 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox18P43680 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox18P43680 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox18P43680 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC12.23□□□□□ -0.45
Sox18P43680 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox18P43680 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.23□□□□□ -0.45
Sox18P43680 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox18P43680 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox18P43680 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox18P43680 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox18P43680 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC12.23□□□□□ -0.45
Sox18P43680 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox18P43680 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox18P43680 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox18P43680 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Sox18P43680 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox18P43680 Gm12058-201ENSMUST00000118614 437 ntBASIC12.23□□□□□ -0.45
Sox18P43680 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox18P43680 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Sox18P43680 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC12.23□□□□□ -0.45
Sox18P43680 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.23□□□□□ -0.45
Sox18P43680 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox18P43680 Gm5277-201ENSMUST00000164923 556 ntBASIC12.23□□□□□ -0.45
Sox18P43680 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.23□□□□□ -0.45
Sox18P43680 CT572999.1-201ENSMUST00000220315 1260 ntBASIC12.23□□□□□ -0.45
Sox18P43680 AC153512.2-201ENSMUST00000220363 1273 ntTSL 5 BASIC12.23□□□□□ -0.45
Sox18P43680 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.23□□□□□ -0.45
Sox18P43680 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox18P43680 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox18P43680 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox18P43680 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox18P43680 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox18P43680 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox18P43680 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Sox18P43680 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox18P43680 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox18P43680 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox18P43680 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox18P43680 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox18P43680 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox18P43680 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.23□□□□□ -0.45
Sox18P43680 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.23□□□□□ -0.45
Sox18P43680 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox18P43680 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox18P43680 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Sox18P43680 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox18P43680 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Sox18P43680 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Sox18P43680 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms