Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.19□□□□□ -0.46
Tnfsf4P43488 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf4P43488 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf4P43488 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.19□□□□□ -0.46
Tnfsf4P43488 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf4P43488 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf4P43488 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf4P43488 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf4P43488 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf4P43488 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf4P43488 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf4P43488 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf4P43488 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.19□□□□□ -0.46
Tnfsf4P43488 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf4P43488 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.19□□□□□ -0.46
Tnfsf4P43488 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Tnfsf4P43488 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf4P43488 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Tnfsf4P43488 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Tnfsf4P43488 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf4P43488 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf4P43488 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf4P43488 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf4P43488 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf4P43488 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf4P43488 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf4P43488 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Tnfsf4P43488 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf4P43488 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf4P43488 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Tnfsf4P43488 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf4P43488 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
Tnfsf4P43488 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf4P43488 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Tnfsf4P43488 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Tnfsf4P43488 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Tnfsf4P43488 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.18□□□□□ -0.46
Tnfsf4P43488 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf4P43488 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.18□□□□□ -0.46
Tnfsf4P43488 Gm16479-201ENSMUST00000121706 932 ntBASIC12.18□□□□□ -0.46
Tnfsf4P43488 Gm22121-201ENSMUST00000175148 54 ntBASIC12.18□□□□□ -0.46
Tnfsf4P43488 Gm18018-201ENSMUST00000198273 408 ntBASIC12.18□□□□□ -0.46
Tnfsf4P43488 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.18□□□□□ -0.46
Tnfsf4P43488 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf4P43488 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf4P43488 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf4P43488 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.18□□□□□ -0.46
Tnfsf4P43488 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.18□□□□□ -0.46
Tnfsf4P43488 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Tnfsf4P43488 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf4P43488 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf4P43488 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf4P43488 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf4P43488 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.18□□□□□ -0.46
Tnfsf4P43488 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.18□□□□□ -0.46
Tnfsf4P43488 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf4P43488 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf4P43488 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.18□□□□□ -0.46
Tnfsf4P43488 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf4P43488 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfsf4P43488 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfsf4P43488 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfsf4P43488 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.17□□□□□ -0.46
Tnfsf4P43488 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfsf4P43488 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfsf4P43488 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfsf4P43488 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfsf4P43488 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.17□□□□□ -0.46
Tnfsf4P43488 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfsf4P43488 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfsf4P43488 Gm11637-201ENSMUST00000120601 592 ntBASIC12.17□□□□□ -0.46
Tnfsf4P43488 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.17□□□□□ -0.46
Tnfsf4P43488 Gm14760-201ENSMUST00000121831 999 ntBASIC12.17□□□□□ -0.46
Tnfsf4P43488 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfsf4P43488 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfsf4P43488 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Tnfsf4P43488 Gm17208-201ENSMUST00000168388 535 ntBASIC12.17□□□□□ -0.46
Tnfsf4P43488 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfsf4P43488 Gm5866-201ENSMUST00000177881 973 ntBASIC12.17□□□□□ -0.46
Tnfsf4P43488 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Tnfsf4P43488 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.17□□□□□ -0.46
Tnfsf4P43488 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.17□□□□□ -0.46
Tnfsf4P43488 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfsf4P43488 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfsf4P43488 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfsf4P43488 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfsf4P43488 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfsf4P43488 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfsf4P43488 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.17□□□□□ -0.46
Tnfsf4P43488 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfsf4P43488 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.17□□□□□ -0.46
Tnfsf4P43488 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfsf4P43488 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfsf4P43488 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfsf4P43488 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.16□□□□□ -0.46
Tnfsf4P43488 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfsf4P43488 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfsf4P43488 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfsf4P43488 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfsf4P43488 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 93.3 ms