Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Cdh4P39038 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.12□□□□□ -0.47
Cdh4P39038 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.12□□□□□ -0.47
Cdh4P39038 Gm38092-201ENSMUST00000195600 653 ntBASIC12.12□□□□□ -0.47
Cdh4P39038 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cdh4P39038 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.12□□□□□ -0.47
Cdh4P39038 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.12□□□□□ -0.47
Cdh4P39038 Gm5904-201ENSMUST00000210286 865 ntBASIC12.12□□□□□ -0.47
Cdh4P39038 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.12□□□□□ -0.47
Cdh4P39038 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh4P39038 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh4P39038 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh4P39038 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh4P39038 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh4P39038 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.12□□□□□ -0.47
Cdh4P39038 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Cdh4P39038 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh4P39038 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh4P39038 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Cdh4P39038 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh4P39038 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh4P39038 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh4P39038 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh4P39038 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh4P39038 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.12□□□□□ -0.47
Cdh4P39038 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh4P39038 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdh4P39038 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdh4P39038 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdh4P39038 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdh4P39038 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Cdh4P39038 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdh4P39038 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdh4P39038 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdh4P39038 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.11□□□□□ -0.47
Cdh4P39038 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdh4P39038 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdh4P39038 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdh4P39038 Mir1247-201ENSMUST00000116706 82 ntBASIC12.11□□□□□ -0.47
Cdh4P39038 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.11□□□□□ -0.47
Cdh4P39038 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.11□□□□□ -0.47
Cdh4P39038 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.11□□□□□ -0.47
Cdh4P39038 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.11□□□□□ -0.47
Cdh4P39038 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.11□□□□□ -0.47
Cdh4P39038 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.11□□□□□ -0.47
Cdh4P39038 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Cdh4P39038 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.11□□□□□ -0.47
Cdh4P39038 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Cdh4P39038 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.11□□□□□ -0.47
Cdh4P39038 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdh4P39038 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdh4P39038 Gm9823-201ENSMUST00000051212 327 ntBASIC12.11□□□□□ -0.47
Cdh4P39038 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdh4P39038 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdh4P39038 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdh4P39038 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdh4P39038 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdh4P39038 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdh4P39038 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Cdh4P39038 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh4P39038 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh4P39038 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.1□□□□□ -0.47
Cdh4P39038 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh4P39038 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh4P39038 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh4P39038 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cdh4P39038 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh4P39038 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh4P39038 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh4P39038 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh4P39038 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Cdh4P39038 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Cdh4P39038 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.1□□□□□ -0.47
Cdh4P39038 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh4P39038 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cdh4P39038 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.1□□□□□ -0.47
Cdh4P39038 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.1□□□□□ -0.47
Cdh4P39038 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh4P39038 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.1□□□□□ -0.47
Cdh4P39038 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh4P39038 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.1□□□□□ -0.47
Cdh4P39038 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.1□□□□□ -0.47
Cdh4P39038 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.1□□□□□ -0.47
Cdh4P39038 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh4P39038 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cdh4P39038 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh4P39038 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.1□□□□□ -0.47
Cdh4P39038 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.1□□□□□ -0.47
Cdh4P39038 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.1□□□□□ -0.47
Cdh4P39038 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.1□□□□□ -0.47
Cdh4P39038 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh4P39038 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.1□□□□□ -0.47
Cdh4P39038 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh4P39038 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Cdh4P39038 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.1□□□□□ -0.47
Cdh4P39038 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.1□□□□□ -0.47
Cdh4P39038 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh4P39038 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh4P39038 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdh4P39038 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms