Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LdlrP35951 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LdlrP35951 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.59□□□□□ -0.39
LdlrP35951 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LdlrP35951 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LdlrP35951 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LdlrP35951 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LdlrP35951 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LdlrP35951 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LdlrP35951 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LdlrP35951 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
LdlrP35951 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LdlrP35951 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.59□□□□□ -0.39
LdlrP35951 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LdlrP35951 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
LdlrP35951 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.58□□□□□ -0.39
LdlrP35951 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
LdlrP35951 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.58□□□□□ -0.39
LdlrP35951 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
LdlrP35951 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.39
LdlrP35951 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.39
LdlrP35951 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
LdlrP35951 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LdlrP35951 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
LdlrP35951 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
LdlrP35951 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.58□□□□□ -0.4
LdlrP35951 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.58□□□□□ -0.4
LdlrP35951 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LdlrP35951 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
LdlrP35951 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LdlrP35951 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LdlrP35951 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
LdlrP35951 Gm13612-201ENSMUST00000119276 390 ntBASIC12.58□□□□□ -0.4
LdlrP35951 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LdlrP35951 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LdlrP35951 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LdlrP35951 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.58□□□□□ -0.4
LdlrP35951 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.58□□□□□ -0.4
LdlrP35951 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
LdlrP35951 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LdlrP35951 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.58□□□□□ -0.4
LdlrP35951 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LdlrP35951 Gm44069-201ENSMUST00000204898 506 ntBASIC12.58□□□□□ -0.4
LdlrP35951 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.58□□□□□ -0.4
LdlrP35951 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LdlrP35951 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LdlrP35951 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LdlrP35951 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
LdlrP35951 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
LdlrP35951 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
LdlrP35951 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
LdlrP35951 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
LdlrP35951 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LdlrP35951 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LdlrP35951 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
LdlrP35951 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
LdlrP35951 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LdlrP35951 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LdlrP35951 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
LdlrP35951 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
LdlrP35951 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LdlrP35951 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
LdlrP35951 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LdlrP35951 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LdlrP35951 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LdlrP35951 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LdlrP35951 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LdlrP35951 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.57□□□□□ -0.4
LdlrP35951 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
LdlrP35951 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
LdlrP35951 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
LdlrP35951 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.57□□□□□ -0.4
LdlrP35951 Gm15371-201ENSMUST00000117057 784 ntBASIC12.57□□□□□ -0.4
LdlrP35951 Gm16202-201ENSMUST00000117532 544 ntBASIC12.57□□□□□ -0.4
LdlrP35951 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.57□□□□□ -0.4
LdlrP35951 Gm12291-201ENSMUST00000121627 311 ntBASIC12.57□□□□□ -0.4
LdlrP35951 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LdlrP35951 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.57□□□□□ -0.4
LdlrP35951 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
LdlrP35951 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LdlrP35951 Gm9630-201ENSMUST00000178304 885 ntBASIC12.57□□□□□ -0.4
LdlrP35951 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.57□□□□□ -0.4
LdlrP35951 Gm6458-201ENSMUST00000211573 635 ntBASIC12.57□□□□□ -0.4
LdlrP35951 Gm6983-201ENSMUST00000214912 628 ntBASIC12.57□□□□□ -0.4
LdlrP35951 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LdlrP35951 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.57□□□□□ -0.4
LdlrP35951 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.57□□□□□ -0.4
LdlrP35951 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
LdlrP35951 Gm7399-201ENSMUST00000032395 858 ntBASIC12.57□□□□□ -0.4
LdlrP35951 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LdlrP35951 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LdlrP35951 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.57□□□□□ -0.4
LdlrP35951 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LdlrP35951 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LdlrP35951 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LdlrP35951 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.57□□□□□ -0.4
LdlrP35951 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.57□□□□□ -0.4
LdlrP35951 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
LdlrP35951 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LdlrP35951 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms