Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Pde6bP23440 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pde6bP23440 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pde6bP23440 Gm7293-201ENSMUST00000216682 1007 ntBASIC13.83□□□□□ -0.2
Pde6bP23440 AC155637.1-201ENSMUST00000218560 636 ntBASIC13.83□□□□□ -0.2
Pde6bP23440 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Pde6bP23440 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.83□□□□□ -0.2
Pde6bP23440 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Pde6bP23440 Gm22058-201ENSMUST00000083393 310 ntBASIC13.83□□□□□ -0.2
Pde6bP23440 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pde6bP23440 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pde6bP23440 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pde6bP23440 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.83□□□□□ -0.2
Pde6bP23440 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pde6bP23440 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pde6bP23440 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Pde6bP23440 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pde6bP23440 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pde6bP23440 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pde6bP23440 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pde6bP23440 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pde6bP23440 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Pde6bP23440 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pde6bP23440 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Pde6bP23440 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pde6bP23440 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pde6bP23440 Daam2-202ENSMUST00000224595 1926 ntBASIC13.82□□□□□ -0.2
Pde6bP23440 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pde6bP23440 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.82□□□□□ -0.2
Pde6bP23440 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Pde6bP23440 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pde6bP23440 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Pde6bP23440 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pde6bP23440 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pde6bP23440 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pde6bP23440 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Pde6bP23440 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.82□□□□□ -0.2
Pde6bP23440 Gm11930-201ENSMUST00000117788 190 ntBASIC13.82□□□□□ -0.2
Pde6bP23440 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pde6bP23440 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC13.82□□□□□ -0.2
Pde6bP23440 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Pde6bP23440 Gm16505-201ENSMUST00000179981 232 ntBASIC13.82□□□□□ -0.2
Pde6bP23440 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC13.82□□□□□ -0.2
Pde6bP23440 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pde6bP23440 Gm38317-201ENSMUST00000195564 343 ntBASIC13.82□□□□□ -0.2
Pde6bP23440 Rps4l-202ENSMUST00000204242 789 ntBASIC13.82□□□□□ -0.2
Pde6bP23440 Gm44967-201ENSMUST00000207047 631 ntBASIC13.82□□□□□ -0.2
Pde6bP23440 Gm18212-201ENSMUST00000211678 889 ntBASIC13.82□□□□□ -0.2
Pde6bP23440 AC073947.1-201ENSMUST00000216991 649 ntBASIC13.82□□□□□ -0.2
Pde6bP23440 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.82□□□□□ -0.2
Pde6bP23440 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC13.82□□□□□ -0.2
Pde6bP23440 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pde6bP23440 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pde6bP23440 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pde6bP23440 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.82□□□□□ -0.2
Pde6bP23440 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Pde6bP23440 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pde6bP23440 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pde6bP23440 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pde6bP23440 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pde6bP23440 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Pde6bP23440 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pde6bP23440 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pde6bP23440 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pde6bP23440 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pde6bP23440 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pde6bP23440 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.82□□□□□ -0.2
Pde6bP23440 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.81□□□□□ -0.2
Pde6bP23440 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Pde6bP23440 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pde6bP23440 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pde6bP23440 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pde6bP23440 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pde6bP23440 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pde6bP23440 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pde6bP23440 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pde6bP23440 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pde6bP23440 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.81□□□□□ -0.2
Pde6bP23440 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pde6bP23440 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pde6bP23440 Gm15547-201ENSMUST00000122152 333 ntBASIC13.81□□□□□ -0.2
Pde6bP23440 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pde6bP23440 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC13.81□□□□□ -0.2
Pde6bP23440 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pde6bP23440 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC13.81□□□□□ -0.2
Pde6bP23440 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.81□□□□□ -0.2
Pde6bP23440 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC13.81□□□□□ -0.2
Pde6bP23440 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pde6bP23440 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pde6bP23440 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pde6bP23440 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pde6bP23440 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pde6bP23440 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pde6bP23440 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pde6bP23440 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.81□□□□□ -0.2
Pde6bP23440 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.81□□□□□ -0.2
Pde6bP23440 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
Pde6bP23440 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC13.81□□□□□ -0.2
Pde6bP23440 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pde6bP23440 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 105.7 ms