Protein–RNA interactions for Protein: P20033

Pdgfa, Platelet-derived growth factor subunit A, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfaP20033 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PdgfaP20033 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.64□□□□□ -0.39
PdgfaP20033 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.64□□□□□ -0.39
PdgfaP20033 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
PdgfaP20033 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.63□□□□□ -0.39
PdgfaP20033 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.63□□□□□ -0.39
PdgfaP20033 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdgfaP20033 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdgfaP20033 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
PdgfaP20033 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdgfaP20033 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdgfaP20033 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdgfaP20033 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PdgfaP20033 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdgfaP20033 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdgfaP20033 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
PdgfaP20033 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC12.63□□□□□ -0.39
PdgfaP20033 Gm29127-201ENSMUST00000188304 517 ntBASIC12.63□□□□□ -0.39
PdgfaP20033 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.63□□□□□ -0.39
PdgfaP20033 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdgfaP20033 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdgfaP20033 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.63□□□□□ -0.39
PdgfaP20033 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdgfaP20033 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdgfaP20033 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdgfaP20033 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
PdgfaP20033 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdgfaP20033 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PdgfaP20033 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
PdgfaP20033 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PdgfaP20033 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PdgfaP20033 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfaP20033 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfaP20033 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
PdgfaP20033 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfaP20033 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfaP20033 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
PdgfaP20033 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfaP20033 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfaP20033 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.62□□□□□ -0.39
PdgfaP20033 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfaP20033 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.62□□□□□ -0.39
PdgfaP20033 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfaP20033 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
PdgfaP20033 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.62□□□□□ -0.39
PdgfaP20033 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
PdgfaP20033 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfaP20033 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfaP20033 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfaP20033 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.62□□□□□ -0.39
PdgfaP20033 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.62□□□□□ -0.39
PdgfaP20033 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
PdgfaP20033 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfaP20033 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfaP20033 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.62□□□□□ -0.39
PdgfaP20033 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.62□□□□□ -0.39
PdgfaP20033 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.62□□□□□ -0.39
PdgfaP20033 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.62□□□□□ -0.39
PdgfaP20033 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.62□□□□□ -0.39
PdgfaP20033 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.62□□□□□ -0.39
PdgfaP20033 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfaP20033 Gm18027-201ENSMUST00000218947 619 ntBASIC12.62□□□□□ -0.39
PdgfaP20033 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.62□□□□□ -0.39
PdgfaP20033 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfaP20033 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
PdgfaP20033 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfaP20033 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfaP20033 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfaP20033 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfaP20033 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfaP20033 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfaP20033 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfaP20033 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfaP20033 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfaP20033 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
PdgfaP20033 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfaP20033 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfaP20033 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PdgfaP20033 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
PdgfaP20033 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
PdgfaP20033 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
PdgfaP20033 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.61□□□□□ -0.39
PdgfaP20033 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
PdgfaP20033 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.61□□□□□ -0.39
PdgfaP20033 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
PdgfaP20033 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PdgfaP20033 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
PdgfaP20033 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
PdgfaP20033 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PdgfaP20033 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PdgfaP20033 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PdgfaP20033 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PdgfaP20033 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
PdgfaP20033 Gm26464-201ENSMUST00000157094 305 ntBASIC12.61□□□□□ -0.39
PdgfaP20033 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.61□□□□□ -0.39
PdgfaP20033 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.61□□□□□ -0.39
PdgfaP20033 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PdgfaP20033 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
PdgfaP20033 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PdgfaP20033 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms