Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Fv4P11370 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Fv4P11370 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Fv4P11370 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Fv4P11370 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Fv4P11370 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Fv4P11370 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Fv4P11370 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Fv4P11370 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.2□□□□□ -0.46
Fv4P11370 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fv4P11370 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.2□□□□□ -0.46
Fv4P11370 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Fv4P11370 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.2□□□□□ -0.46
Fv4P11370 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fv4P11370 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Fv4P11370 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.2□□□□□ -0.46
Fv4P11370 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fv4P11370 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fv4P11370 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fv4P11370 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Fv4P11370 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.2□□□□□ -0.46
Fv4P11370 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Fv4P11370 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fv4P11370 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fv4P11370 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fv4P11370 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fv4P11370 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fv4P11370 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fv4P11370 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Fv4P11370 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.2□□□□□ -0.46
Fv4P11370 Gm15806-201ENSMUST00000120696 955 ntBASIC12.2□□□□□ -0.46
Fv4P11370 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.2□□□□□ -0.46
Fv4P11370 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.2□□□□□ -0.46
Fv4P11370 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.2□□□□□ -0.46
Fv4P11370 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.2□□□□□ -0.46
Fv4P11370 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fv4P11370 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Fv4P11370 Gm27486-201ENSMUST00000184923 80 ntBASIC12.2□□□□□ -0.46
Fv4P11370 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fv4P11370 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fv4P11370 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fv4P11370 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fv4P11370 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Fv4P11370 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fv4P11370 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fv4P11370 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fv4P11370 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fv4P11370 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fv4P11370 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fv4P11370 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fv4P11370 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Fv4P11370 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.2□□□□□ -0.46
Fv4P11370 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Fv4P11370 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Fv4P11370 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fv4P11370 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Fv4P11370 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fv4P11370 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fv4P11370 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Fv4P11370 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Fv4P11370 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Fv4P11370 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Fv4P11370 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Fv4P11370 Pck2-205ENSMUST00000226352 2784 ntBASIC12.19□□□□□ -0.46
Fv4P11370 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.19□□□□□ -0.46
Fv4P11370 Gm12384-201ENSMUST00000119228 919 ntBASIC12.19□□□□□ -0.46
Fv4P11370 Gm24644-201ENSMUST00000157114 139 ntBASIC12.19□□□□□ -0.46
Fv4P11370 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Fv4P11370 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.19□□□□□ -0.46
Fv4P11370 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.19□□□□□ -0.46
Fv4P11370 Gm27390-201ENSMUST00000184516 176 ntBASIC12.19□□□□□ -0.46
Fv4P11370 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.19□□□□□ -0.46
Fv4P11370 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Fv4P11370 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Fv4P11370 Gm24526-201ENSMUST00000082921 158 ntBASIC12.19□□□□□ -0.46
Fv4P11370 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Fv4P11370 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Fv4P11370 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.19□□□□□ -0.46
Fv4P11370 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Fv4P11370 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Fv4P11370 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Fv4P11370 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.19□□□□□ -0.46
Fv4P11370 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Fv4P11370 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Fv4P11370 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.19□□□□□ -0.46
Fv4P11370 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Fv4P11370 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Fv4P11370 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Fv4P11370 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Fv4P11370 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Fv4P11370 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Fv4P11370 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Fv4P11370 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.18□□□□□ -0.46
Fv4P11370 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Fv4P11370 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
Fv4P11370 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Fv4P11370 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Fv4P11370 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Fv4P11370 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Fv4P11370 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms