Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl3P10855 Ntng1-201ENSMUST00000051253 327 ntBASIC11.13□□□□□ -0.63
Ccl3P10855 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.13□□□□□ -0.63
Ccl3P10855 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Ccl3P10855 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.13□□□□□ -0.63
Ccl3P10855 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl3P10855 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl3P10855 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Ccl3P10855 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl3P10855 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Ccl3P10855 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.13□□□□□ -0.63
Ccl3P10855 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.13□□□□□ -0.63
Ccl3P10855 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl3P10855 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.12□□□□□ -0.63
Ccl3P10855 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl3P10855 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl3P10855 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl3P10855 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl3P10855 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl3P10855 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl3P10855 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl3P10855 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl3P10855 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl3P10855 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl3P10855 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Ccl3P10855 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl3P10855 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl3P10855 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Ccl3P10855 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl3P10855 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl3P10855 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl3P10855 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl3P10855 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl3P10855 Gm5051-201ENSMUST00000204085 485 ntBASIC11.12□□□□□ -0.63
Ccl3P10855 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.12□□□□□ -0.63
Ccl3P10855 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.12□□□□□ -0.63
Ccl3P10855 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl3P10855 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl3P10855 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl3P10855 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl3P10855 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Ccl3P10855 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl3P10855 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl3P10855 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.12□□□□□ -0.63
Ccl3P10855 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl3P10855 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl3P10855 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.11□□□□□ -0.63
Ccl3P10855 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl3P10855 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Ccl3P10855 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.11□□□□□ -0.63
Ccl3P10855 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl3P10855 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl3P10855 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl3P10855 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl3P10855 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl3P10855 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
Ccl3P10855 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl3P10855 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl3P10855 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Ccl3P10855 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl3P10855 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl3P10855 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl3P10855 Gm14058-201ENSMUST00000116082 735 ntBASIC11.11□□□□□ -0.63
Ccl3P10855 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.11□□□□□ -0.63
Ccl3P10855 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.11□□□□□ -0.63
Ccl3P10855 Gm15432-201ENSMUST00000121106 195 ntBASIC11.11□□□□□ -0.63
Ccl3P10855 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.11□□□□□ -0.63
Ccl3P10855 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.11□□□□□ -0.63
Ccl3P10855 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.11□□□□□ -0.63
Ccl3P10855 Gm19353-201ENSMUST00000184561 445 ntBASIC11.11□□□□□ -0.63
Ccl3P10855 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC11.11□□□□□ -0.63
Ccl3P10855 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.11□□□□□ -0.63
Ccl3P10855 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC11.11□□□□□ -0.63
Ccl3P10855 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.11□□□□□ -0.63
Ccl3P10855 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl3P10855 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl3P10855 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl3P10855 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Ccl3P10855 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl3P10855 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl3P10855 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl3P10855 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl3P10855 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl3P10855 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl3P10855 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Ccl3P10855 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Ccl3P10855 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl3P10855 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.11□□□□□ -0.63
Ccl3P10855 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl3P10855 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Ccl3P10855 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl3P10855 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl3P10855 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl3P10855 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl3P10855 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Ccl3P10855 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccl3P10855 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl3P10855 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl3P10855 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl3P10855 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms