Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11□□□□□ -0.65
UbbP0CG49 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UbbP0CG49 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UbbP0CG49 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UbbP0CG49 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UbbP0CG49 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
UbbP0CG49 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UbbP0CG49 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11□□□□□ -0.65
UbbP0CG49 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
UbbP0CG49 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11□□□□□ -0.65
UbbP0CG49 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC11□□□□□ -0.65
UbbP0CG49 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11□□□□□ -0.65
UbbP0CG49 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UbbP0CG49 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11□□□□□ -0.65
UbbP0CG49 Mir6956-201ENSMUST00000183598 62 ntBASIC11□□□□□ -0.65
UbbP0CG49 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11□□□□□ -0.65
UbbP0CG49 Gm18307-201ENSMUST00000206864 949 ntBASIC11□□□□□ -0.65
UbbP0CG49 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC11□□□□□ -0.65
UbbP0CG49 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UbbP0CG49 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UbbP0CG49 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11□□□□□ -0.65
UbbP0CG49 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UbbP0CG49 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UbbP0CG49 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11□□□□□ -0.65
UbbP0CG49 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
UbbP0CG49 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11□□□□□ -0.65
UbbP0CG49 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
UbbP0CG49 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11□□□□□ -0.65
UbbP0CG49 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
UbbP0CG49 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11□□□□□ -0.65
UbbP0CG49 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
UbbP0CG49 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UbbP0CG49 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
UbbP0CG49 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
UbbP0CG49 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UbbP0CG49 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
UbbP0CG49 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UbbP0CG49 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UbbP0CG49 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
UbbP0CG49 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
UbbP0CG49 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
UbbP0CG49 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
UbbP0CG49 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
UbbP0CG49 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
UbbP0CG49 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
UbbP0CG49 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
UbbP0CG49 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
UbbP0CG49 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
UbbP0CG49 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
UbbP0CG49 Gm14921-201ENSMUST00000118643 908 ntBASIC10.99□□□□□ -0.65
UbbP0CG49 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
UbbP0CG49 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC10.99□□□□□ -0.65
UbbP0CG49 Gm7558-201ENSMUST00000193221 1165 ntBASIC10.99□□□□□ -0.65
UbbP0CG49 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC10.99□□□□□ -0.65
UbbP0CG49 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC10.99□□□□□ -0.65
UbbP0CG49 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC10.99□□□□□ -0.65
UbbP0CG49 Gm7730-201ENSMUST00000212486 454 ntBASIC10.99□□□□□ -0.65
UbbP0CG49 AC156560.2-201ENSMUST00000221232 264 ntBASIC10.99□□□□□ -0.65
UbbP0CG49 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
UbbP0CG49 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
UbbP0CG49 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
UbbP0CG49 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
UbbP0CG49 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
UbbP0CG49 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
UbbP0CG49 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
UbbP0CG49 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
UbbP0CG49 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
UbbP0CG49 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
UbbP0CG49 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
UbbP0CG49 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
UbbP0CG49 Gm37437-201ENSMUST00000194451 1937 ntBASIC10.99□□□□□ -0.65
UbbP0CG49 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
UbbP0CG49 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
UbbP0CG49 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
UbbP0CG49 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
UbbP0CG49 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
UbbP0CG49 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
UbbP0CG49 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC10.99□□□□□ -0.65
UbbP0CG49 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
UbbP0CG49 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
UbbP0CG49 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
UbbP0CG49 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC10.98□□□□□ -0.65
UbbP0CG49 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
UbbP0CG49 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
UbbP0CG49 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.98□□□□□ -0.65
UbbP0CG49 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
UbbP0CG49 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UbbP0CG49 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
UbbP0CG49 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UbbP0CG49 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UbbP0CG49 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.98□□□□□ -0.65
UbbP0CG49 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
UbbP0CG49 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
UbbP0CG49 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UbbP0CG49 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
UbbP0CG49 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
UbbP0CG49 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
UbbP0CG49 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UbbP0CG49 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UbbP0CG49 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms