Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
IghmP01872 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.82□□□□□ -0.52
IghmP01872 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.82□□□□□ -0.52
IghmP01872 Gm12490-201ENSMUST00000120255 560 ntBASIC11.82□□□□□ -0.52
IghmP01872 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.82□□□□□ -0.52
IghmP01872 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
IghmP01872 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
IghmP01872 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
IghmP01872 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
IghmP01872 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
IghmP01872 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.82□□□□□ -0.52
IghmP01872 Gm5035-201ENSMUST00000215581 927 ntBASIC11.82□□□□□ -0.52
IghmP01872 Gm8227-201ENSMUST00000223306 571 ntBASIC11.82□□□□□ -0.52
IghmP01872 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.82□□□□□ -0.52
IghmP01872 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
IghmP01872 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
IghmP01872 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
IghmP01872 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
IghmP01872 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
IghmP01872 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
IghmP01872 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
IghmP01872 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
IghmP01872 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
IghmP01872 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
IghmP01872 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
IghmP01872 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
IghmP01872 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.82□□□□□ -0.52
IghmP01872 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
IghmP01872 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
IghmP01872 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
IghmP01872 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.81□□□□□ -0.52
IghmP01872 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
IghmP01872 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.81□□□□□ -0.52
IghmP01872 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
IghmP01872 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
IghmP01872 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
IghmP01872 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
IghmP01872 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
IghmP01872 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
IghmP01872 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
IghmP01872 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
IghmP01872 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
IghmP01872 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
IghmP01872 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
IghmP01872 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
IghmP01872 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
IghmP01872 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
IghmP01872 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
IghmP01872 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
IghmP01872 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.81□□□□□ -0.52
IghmP01872 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.81□□□□□ -0.52
IghmP01872 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
IghmP01872 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.81□□□□□ -0.52
IghmP01872 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.81□□□□□ -0.52
IghmP01872 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
IghmP01872 Gm27847-201ENSMUST00000183711 107 ntBASIC11.81□□□□□ -0.52
IghmP01872 Gm27375-201ENSMUST00000183799 107 ntBASIC11.81□□□□□ -0.52
IghmP01872 Gm27839-201ENSMUST00000184242 106 ntBASIC11.81□□□□□ -0.52
IghmP01872 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.81□□□□□ -0.52
IghmP01872 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
IghmP01872 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.81□□□□□ -0.52
IghmP01872 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
IghmP01872 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
IghmP01872 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
IghmP01872 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
IghmP01872 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
IghmP01872 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
IghmP01872 Gm6091-201ENSMUST00000098307 165 ntBASIC11.81□□□□□ -0.52
IghmP01872 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
IghmP01872 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
IghmP01872 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
IghmP01872 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
IghmP01872 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.81□□□□□ -0.52
IghmP01872 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
IghmP01872 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
IghmP01872 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.81□□□□□ -0.52
IghmP01872 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
IghmP01872 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
IghmP01872 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
IghmP01872 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
IghmP01872 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
IghmP01872 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
IghmP01872 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
IghmP01872 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.8□□□□□ -0.52
IghmP01872 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.8□□□□□ -0.52
IghmP01872 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
IghmP01872 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
IghmP01872 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.8□□□□□ -0.52
IghmP01872 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
IghmP01872 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
IghmP01872 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
IghmP01872 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
IghmP01872 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.8□□□□□ -0.52
IghmP01872 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
IghmP01872 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
IghmP01872 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
IghmP01872 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
IghmP01872 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
IghmP01872 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
IghmP01872 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms