Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Gm24548-201ENSMUST00000158650 108 ntBASIC12.41□□□□□ -0.42
ClppO88696 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
ClppO88696 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClppO88696 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ClppO88696 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.41□□□□□ -0.42
ClppO88696 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ClppO88696 Gm5781-201ENSMUST00000219792 443 ntBASIC12.41□□□□□ -0.42
ClppO88696 Gm45930-201ENSMUST00000221330 292 ntBASIC12.41□□□□□ -0.42
ClppO88696 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.41□□□□□ -0.42
ClppO88696 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClppO88696 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
ClppO88696 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClppO88696 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
ClppO88696 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.41□□□□□ -0.42
ClppO88696 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClppO88696 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClppO88696 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClppO88696 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.41□□□□□ -0.42
ClppO88696 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
ClppO88696 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClppO88696 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
ClppO88696 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
ClppO88696 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.4□□□□□ -0.42
ClppO88696 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ClppO88696 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClppO88696 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
ClppO88696 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ClppO88696 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
ClppO88696 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClppO88696 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClppO88696 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClppO88696 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClppO88696 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClppO88696 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClppO88696 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
ClppO88696 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClppO88696 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClppO88696 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClppO88696 Gm11978-201ENSMUST00000122315 466 ntBASIC12.4□□□□□ -0.42
ClppO88696 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.4□□□□□ -0.42
ClppO88696 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.4□□□□□ -0.42
ClppO88696 Mir8109-201ENSMUST00000184375 117 ntBASIC12.4□□□□□ -0.42
ClppO88696 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.4□□□□□ -0.42
ClppO88696 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.4□□□□□ -0.42
ClppO88696 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ClppO88696 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.4□□□□□ -0.42
ClppO88696 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.4□□□□□ -0.42
ClppO88696 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClppO88696 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClppO88696 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.4□□□□□ -0.42
ClppO88696 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
ClppO88696 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClppO88696 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ClppO88696 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
ClppO88696 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
ClppO88696 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClppO88696 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClppO88696 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
ClppO88696 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
ClppO88696 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
ClppO88696 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
ClppO88696 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
ClppO88696 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
ClppO88696 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
ClppO88696 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
ClppO88696 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClppO88696 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.39□□□□□ -0.43
ClppO88696 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClppO88696 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ClppO88696 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClppO88696 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ClppO88696 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClppO88696 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClppO88696 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ClppO88696 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClppO88696 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClppO88696 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClppO88696 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ClppO88696 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ClppO88696 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.39□□□□□ -0.43
ClppO88696 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClppO88696 Gm6023-201ENSMUST00000118217 606 ntBASIC12.39□□□□□ -0.43
ClppO88696 Gm37042-201ENSMUST00000193816 581 ntBASIC12.39□□□□□ -0.43
ClppO88696 Gm18584-201ENSMUST00000203098 964 ntBASIC12.39□□□□□ -0.43
ClppO88696 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.39□□□□□ -0.43
ClppO88696 Gm7046-201ENSMUST00000221351 977 ntBASIC12.39□□□□□ -0.43
ClppO88696 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
ClppO88696 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClppO88696 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClppO88696 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClppO88696 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ClppO88696 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClppO88696 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClppO88696 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClppO88696 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClppO88696 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClppO88696 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClppO88696 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ClppO88696 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClppO88696 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms