Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 4833418N02Rik-201ENSMUST00000137539 1820 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Pfdn2O70591 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Pfdn2O70591 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pfdn2O70591 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pfdn2O70591 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Pfdn2O70591 Gm28323-201ENSMUST00000186817 2499 ntBASIC10.63□□□□□ -0.71
Pfdn2O70591 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pfdn2O70591 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC10.63□□□□□ -0.71
Pfdn2O70591 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pfdn2O70591 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC10.63□□□□□ -0.71
Pfdn2O70591 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pfdn2O70591 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Pfdn2O70591 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC10.63□□□□□ -0.71
Pfdn2O70591 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC10.63□□□□□ -0.71
Pfdn2O70591 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC10.63□□□□□ -0.71
Pfdn2O70591 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC10.63□□□□□ -0.71
Pfdn2O70591 Gm27533-201ENSMUST00000183800 152 ntBASIC10.63□□□□□ -0.71
Pfdn2O70591 Gm43930-201ENSMUST00000203868 845 ntBASIC10.63□□□□□ -0.71
Pfdn2O70591 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pfdn2O70591 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Pfdn2O70591 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Pfdn2O70591 Foxm1-202ENSMUST00000112148 2229 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Pfdn2O70591 AC122314.1-201ENSMUST00000223056 2239 ntBASIC10.63□□□□□ -0.71
Pfdn2O70591 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pfdn2O70591 Gm13859-201ENSMUST00000119936 1423 ntBASIC10.63□□□□□ -0.71
Pfdn2O70591 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Pfdn2O70591 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pfdn2O70591 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pfdn2O70591 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pfdn2O70591 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Pfdn2O70591 AC151895.1-201ENSMUST00000219025 1742 ntBASIC10.63□□□□□ -0.71
Pfdn2O70591 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pfdn2O70591 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Pfdn2O70591 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pfdn2O70591 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Pfdn2O70591 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC10.63□□□□□ -0.71
Pfdn2O70591 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC10.63□□□□□ -0.71
Pfdn2O70591 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pfdn2O70591 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pfdn2O70591 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pfdn2O70591 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pfdn2O70591 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Pfdn2O70591 Gm5320-201ENSMUST00000207163 1519 ntBASIC10.63□□□□□ -0.71
Pfdn2O70591 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Pfdn2O70591 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Pfdn2O70591 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.63□□□□□ -0.71
Pfdn2O70591 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC10.63□□□□□ -0.71
Pfdn2O70591 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pfdn2O70591 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Pfdn2O70591 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Pfdn2O70591 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pfdn2O70591 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Pfdn2O70591 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC10.62□□□□□ -0.71
Pfdn2O70591 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pfdn2O70591 Gm44851-201ENSMUST00000205735 2309 ntBASIC10.62□□□□□ -0.71
Pfdn2O70591 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pfdn2O70591 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pfdn2O70591 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pfdn2O70591 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Pfdn2O70591 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Pfdn2O70591 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.62□□□□□ -0.71
Pfdn2O70591 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Pfdn2O70591 Gm26308-201ENSMUST00000157768 69 ntBASIC10.62□□□□□ -0.71
Pfdn2O70591 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pfdn2O70591 Gm28941-201ENSMUST00000185536 1017 ntBASIC10.62□□□□□ -0.71
Pfdn2O70591 Gm10829-201ENSMUST00000202084 2988 ntBASIC10.62□□□□□ -0.71
Pfdn2O70591 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC10.62□□□□□ -0.71
Pfdn2O70591 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC10.62□□□□□ -0.71
Pfdn2O70591 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pfdn2O70591 Gm8396-201ENSMUST00000057361 823 ntBASIC10.62□□□□□ -0.71
Pfdn2O70591 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pfdn2O70591 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Pfdn2O70591 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Pfdn2O70591 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Pfdn2O70591 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pfdn2O70591 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Pfdn2O70591 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pfdn2O70591 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Pfdn2O70591 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.62□□□□□ -0.71
Pfdn2O70591 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Pfdn2O70591 Gm17980-201ENSMUST00000217977 2349 ntBASIC10.62□□□□□ -0.71
Pfdn2O70591 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Pfdn2O70591 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Pfdn2O70591 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Pfdn2O70591 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pfdn2O70591 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pfdn2O70591 Gm37513-201ENSMUST00000194830 2268 ntBASIC10.61□□□□□ -0.71
Pfdn2O70591 Gm38378-201ENSMUST00000195153 2268 ntBASIC10.61□□□□□ -0.71
Pfdn2O70591 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Pfdn2O70591 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pfdn2O70591 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pfdn2O70591 Fgf17-202ENSMUST00000227123 1336 ntBASIC10.61□□□□□ -0.71
Pfdn2O70591 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pfdn2O70591 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.61□□□□□ -0.71
Pfdn2O70591 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pfdn2O70591 Cd300lg-202ENSMUST00000107163 2605 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pfdn2O70591 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.61□□□□□ -0.71
Pfdn2O70591 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Pfdn2O70591 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pfdn2O70591 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms