Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trdmt1O55055 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
Trdmt1O55055 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trdmt1O55055 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Trdmt1O55055 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trdmt1O55055 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trdmt1O55055 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trdmt1O55055 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trdmt1O55055 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trdmt1O55055 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trdmt1O55055 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trdmt1O55055 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trdmt1O55055 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trdmt1O55055 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trdmt1O55055 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trdmt1O55055 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trdmt1O55055 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trdmt1O55055 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC13.88□□□□□ -0.19
Trdmt1O55055 Gm15515-201ENSMUST00000117827 822 ntBASIC13.88□□□□□ -0.19
Trdmt1O55055 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC13.88□□□□□ -0.19
Trdmt1O55055 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trdmt1O55055 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trdmt1O55055 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Trdmt1O55055 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC13.88□□□□□ -0.19
Trdmt1O55055 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC13.88□□□□□ -0.19
Trdmt1O55055 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trdmt1O55055 Gm37835-201ENSMUST00000193305 361 ntBASIC13.88□□□□□ -0.19
Trdmt1O55055 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trdmt1O55055 Gm5369-201ENSMUST00000217499 588 ntBASIC13.88□□□□□ -0.19
Trdmt1O55055 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC13.88□□□□□ -0.19
Trdmt1O55055 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trdmt1O55055 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.88□□□□□ -0.19
Trdmt1O55055 Acot6-202ENSMUST00000222921 3622 ntBASIC13.88□□□□□ -0.19
Trdmt1O55055 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trdmt1O55055 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trdmt1O55055 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trdmt1O55055 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trdmt1O55055 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
Trdmt1O55055 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trdmt1O55055 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trdmt1O55055 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trdmt1O55055 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC13.88□□□□□ -0.19
Trdmt1O55055 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trdmt1O55055 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trdmt1O55055 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trdmt1O55055 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trdmt1O55055 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trdmt1O55055 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Trdmt1O55055 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.87□□□□□ -0.19
Trdmt1O55055 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trdmt1O55055 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trdmt1O55055 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.87□□□□□ -0.19
Trdmt1O55055 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trdmt1O55055 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trdmt1O55055 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trdmt1O55055 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trdmt1O55055 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trdmt1O55055 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trdmt1O55055 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.87□□□□□ -0.19
Trdmt1O55055 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trdmt1O55055 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC13.87□□□□□ -0.19
Trdmt1O55055 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trdmt1O55055 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trdmt1O55055 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
Trdmt1O55055 Gm7467-201ENSMUST00000185173 652 ntBASIC13.87□□□□□ -0.19
Trdmt1O55055 Gm3508-201ENSMUST00000186012 792 ntBASIC13.87□□□□□ -0.19
Trdmt1O55055 Gm7207-201ENSMUST00000211575 1067 ntBASIC13.87□□□□□ -0.19
Trdmt1O55055 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trdmt1O55055 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
Trdmt1O55055 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.87□□□□□ -0.19
Trdmt1O55055 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trdmt1O55055 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trdmt1O55055 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Trdmt1O55055 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.87□□□□□ -0.19
Trdmt1O55055 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trdmt1O55055 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trdmt1O55055 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trdmt1O55055 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trdmt1O55055 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trdmt1O55055 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trdmt1O55055 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trdmt1O55055 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Trdmt1O55055 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trdmt1O55055 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.87□□□□□ -0.19
Trdmt1O55055 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trdmt1O55055 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Trdmt1O55055 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.87□□□□□ -0.19
Trdmt1O55055 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trdmt1O55055 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trdmt1O55055 Gm43081-201ENSMUST00000199082 1380 ntBASIC13.86□□□□□ -0.19
Trdmt1O55055 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
Trdmt1O55055 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trdmt1O55055 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trdmt1O55055 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trdmt1O55055 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trdmt1O55055 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trdmt1O55055 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.86□□□□□ -0.19
Trdmt1O55055 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trdmt1O55055 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trdmt1O55055 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms