Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smarce1O54941 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarce1O54941 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarce1O54941 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Smarce1O54941 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarce1O54941 Gm5912-201ENSMUST00000122282 1438 ntBASIC15□□□□□ -0.01
Smarce1O54941 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Smarce1O54941 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smarce1O54941 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smarce1O54941 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarce1O54941 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Smarce1O54941 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarce1O54941 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarce1O54941 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Smarce1O54941 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarce1O54941 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarce1O54941 Gm15703-201ENSMUST00000120250 880 ntBASIC14.99□□□□□ -0.01
Smarce1O54941 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC14.99□□□□□ -0.01
Smarce1O54941 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.99□□□□□ -0.01
Smarce1O54941 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC14.99□□□□□ -0.01
Smarce1O54941 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarce1O54941 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Smarce1O54941 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.99□□□□□ -0.01
Smarce1O54941 Gm2824-203ENSMUST00000226189 1228 ntBASIC14.99□□□□□ -0.01
Smarce1O54941 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.99□□□□□ -0.01
Smarce1O54941 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC14.99□□□□□ -0.01
Smarce1O54941 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.99□□□□□ -0.01
Smarce1O54941 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarce1O54941 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarce1O54941 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Smarce1O54941 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Smarce1O54941 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarce1O54941 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smarce1O54941 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Smarce1O54941 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Smarce1O54941 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarce1O54941 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smarce1O54941 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC14.99□□□□□ -0.01
Smarce1O54941 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarce1O54941 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Smarce1O54941 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarce1O54941 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarce1O54941 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smarce1O54941 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smarce1O54941 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Smarce1O54941 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarce1O54941 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC14.98□□□□□ -0.01
Smarce1O54941 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarce1O54941 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarce1O54941 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarce1O54941 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarce1O54941 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarce1O54941 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC14.98□□□□□ -0.01
Smarce1O54941 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarce1O54941 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarce1O54941 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarce1O54941 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarce1O54941 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Smarce1O54941 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarce1O54941 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Smarce1O54941 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC14.98□□□□□ -0.01
Smarce1O54941 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.98□□□□□ -0.01
Smarce1O54941 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smarce1O54941 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Smarce1O54941 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarce1O54941 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarce1O54941 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.98□□□□□ -0.01
Smarce1O54941 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Smarce1O54941 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarce1O54941 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarce1O54941 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarce1O54941 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC14.98□□□□□ -0.01
Smarce1O54941 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Smarce1O54941 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarce1O54941 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarce1O54941 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarce1O54941 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarce1O54941 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smarce1O54941 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smarce1O54941 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smarce1O54941 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarce1O54941 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarce1O54941 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarce1O54941 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarce1O54941 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarce1O54941 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarce1O54941 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smarce1O54941 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarce1O54941 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Smarce1O54941 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarce1O54941 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smarce1O54941 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarce1O54941 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarce1O54941 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarce1O54941 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarce1O54941 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
Smarce1O54941 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14.97□□□□□ -0.01
Smarce1O54941 Gm12091-201ENSMUST00000146791 830 ntBASIC14.97□□□□□ -0.01
Smarce1O54941 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarce1O54941 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms