Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Npc1O35604 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Npc1O35604 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Npc1O35604 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.34□□□□□ -0.43
Npc1O35604 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npc1O35604 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npc1O35604 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Npc1O35604 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npc1O35604 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.34□□□□□ -0.43
Npc1O35604 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npc1O35604 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.34□□□□□ -0.43
Npc1O35604 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npc1O35604 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.34□□□□□ -0.43
Npc1O35604 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Npc1O35604 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npc1O35604 Gm37489-201ENSMUST00000191883 159 ntBASIC12.34□□□□□ -0.43
Npc1O35604 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.34□□□□□ -0.43
Npc1O35604 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.34□□□□□ -0.43
Npc1O35604 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.34□□□□□ -0.43
Npc1O35604 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.34□□□□□ -0.43
Npc1O35604 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.34□□□□□ -0.43
Npc1O35604 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.34□□□□□ -0.43
Npc1O35604 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npc1O35604 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.34□□□□□ -0.43
Npc1O35604 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npc1O35604 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npc1O35604 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npc1O35604 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npc1O35604 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npc1O35604 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Npc1O35604 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npc1O35604 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npc1O35604 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npc1O35604 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Npc1O35604 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npc1O35604 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Npc1O35604 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Npc1O35604 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npc1O35604 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npc1O35604 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npc1O35604 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npc1O35604 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npc1O35604 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Npc1O35604 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.34□□□□□ -0.43
Npc1O35604 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npc1O35604 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Npc1O35604 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npc1O35604 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npc1O35604 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Npc1O35604 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.34□□□□□ -0.43
Npc1O35604 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npc1O35604 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npc1O35604 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Npc1O35604 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Npc1O35604 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.33□□□□□ -0.44
Npc1O35604 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Npc1O35604 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Npc1O35604 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Npc1O35604 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Npc1O35604 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Npc1O35604 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Npc1O35604 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.33□□□□□ -0.44
Npc1O35604 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Npc1O35604 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.33□□□□□ -0.44
Npc1O35604 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.33□□□□□ -0.44
Npc1O35604 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Npc1O35604 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.33□□□□□ -0.44
Npc1O35604 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.33□□□□□ -0.44
Npc1O35604 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Npc1O35604 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.33□□□□□ -0.44
Npc1O35604 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.33□□□□□ -0.44
Npc1O35604 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Npc1O35604 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Npc1O35604 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Npc1O35604 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Npc1O35604 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Npc1O35604 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Npc1O35604 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Npc1O35604 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Npc1O35604 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Npc1O35604 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Npc1O35604 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Npc1O35604 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Npc1O35604 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Npc1O35604 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Npc1O35604 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Npc1O35604 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Npc1O35604 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Npc1O35604 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Npc1O35604 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.33□□□□□ -0.44
Npc1O35604 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Npc1O35604 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Npc1O35604 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.32□□□□□ -0.44
Npc1O35604 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Npc1O35604 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Npc1O35604 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Npc1O35604 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Npc1O35604 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Npc1O35604 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Npc1O35604 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms