Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Efnb3O35393 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Efnb3O35393 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Efnb3O35393 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Efnb3O35393 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Efnb3O35393 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Efnb3O35393 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Efnb3O35393 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Efnb3O35393 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Efnb3O35393 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Efnb3O35393 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Efnb3O35393 AC122860.2-201ENSMUST00000217967 2671 ntBASIC9.99□□□□□ -0.81
Efnb3O35393 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Efnb3O35393 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Efnb3O35393 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC9.99□□□□□ -0.81
Efnb3O35393 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC9.99□□□□□ -0.81
Efnb3O35393 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC9.99□□□□□ -0.81
Efnb3O35393 Gm5354-201ENSMUST00000182417 973 ntBASIC9.99□□□□□ -0.81
Efnb3O35393 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Efnb3O35393 Gm7063-201ENSMUST00000186840 981 ntBASIC9.99□□□□□ -0.81
Efnb3O35393 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC9.99□□□□□ -0.81
Efnb3O35393 Gm31326-201ENSMUST00000191856 1048 ntBASIC9.99□□□□□ -0.81
Efnb3O35393 Gm38223-201ENSMUST00000194484 695 ntBASIC9.99□□□□□ -0.81
Efnb3O35393 Gm44855-201ENSMUST00000205725 362 ntBASIC9.99□□□□□ -0.81
Efnb3O35393 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC9.99□□□□□ -0.81
Efnb3O35393 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC9.99□□□□□ -0.81
Efnb3O35393 CT025535.1-201ENSMUST00000227172 491 ntBASIC9.99□□□□□ -0.81
Efnb3O35393 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Efnb3O35393 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC9.99□□□□□ -0.81
Efnb3O35393 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Efnb3O35393 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Efnb3O35393 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Efnb3O35393 Gm18630-201ENSMUST00000222109 1397 ntBASIC9.99□□□□□ -0.81
Efnb3O35393 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Efnb3O35393 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Efnb3O35393 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Efnb3O35393 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Efnb3O35393 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Efnb3O35393 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Efnb3O35393 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Efnb3O35393 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Efnb3O35393 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Efnb3O35393 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Efnb3O35393 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Efnb3O35393 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Efnb3O35393 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC9.98□□□□□ -0.81
Efnb3O35393 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC9.98□□□□□ -0.81
Efnb3O35393 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Efnb3O35393 AC156031.2-201ENSMUST00000213107 3310 ntBASIC9.98□□□□□ -0.81
Efnb3O35393 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Efnb3O35393 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC9.98□□□□□ -0.81
Efnb3O35393 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Efnb3O35393 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Efnb3O35393 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC9.98□□□□□ -0.81
Efnb3O35393 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC9.98□□□□□ -0.81
Efnb3O35393 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC9.98□□□□□ -0.81
Efnb3O35393 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Efnb3O35393 Gm9061-201ENSMUST00000182707 1006 ntBASIC9.98□□□□□ -0.81
Efnb3O35393 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC9.98□□□□□ -0.81
Efnb3O35393 Gm18916-201ENSMUST00000198264 1246 ntBASIC9.98□□□□□ -0.81
Efnb3O35393 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC9.98□□□□□ -0.81
Efnb3O35393 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Efnb3O35393 Gm6458-201ENSMUST00000211573 635 ntBASIC9.98□□□□□ -0.81
Efnb3O35393 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Efnb3O35393 AC122305.4-201ENSMUST00000216159 1206 ntBASIC9.98□□□□□ -0.81
Efnb3O35393 AC155258.1-201ENSMUST00000219303 253 ntBASIC9.98□□□□□ -0.81
Efnb3O35393 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC9.98□□□□□ -0.81
Efnb3O35393 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Efnb3O35393 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Efnb3O35393 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Efnb3O35393 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC9.98□□□□□ -0.81
Efnb3O35393 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC9.98□□□□□ -0.81
Efnb3O35393 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC9.98□□□□□ -0.81
Efnb3O35393 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Efnb3O35393 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Efnb3O35393 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Efnb3O35393 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Efnb3O35393 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC9.98□□□□□ -0.81
Efnb3O35393 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Efnb3O35393 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Efnb3O35393 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Efnb3O35393 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Efnb3O35393 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Efnb3O35393 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC9.98□□□□□ -0.81
Efnb3O35393 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Efnb3O35393 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Efnb3O35393 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Efnb3O35393 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Efnb3O35393 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Efnb3O35393 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Efnb3O35393 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Efnb3O35393 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Efnb3O35393 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC9.97□□□□□ -0.81
Efnb3O35393 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Efnb3O35393 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Efnb3O35393 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Efnb3O35393 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Efnb3O35393 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Efnb3O35393 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Efnb3O35393 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC9.97□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms