Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trove2O08848 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trove2O08848 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trove2O08848 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trove2O08848 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC13□□□□□ -0.33
Trove2O08848 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trove2O08848 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trove2O08848 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trove2O08848 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trove2O08848 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trove2O08848 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trove2O08848 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13□□□□□ -0.33
Trove2O08848 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Trove2O08848 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trove2O08848 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trove2O08848 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trove2O08848 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13□□□□□ -0.33
Trove2O08848 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trove2O08848 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13□□□□□ -0.33
Trove2O08848 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13□□□□□ -0.33
Trove2O08848 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13□□□□□ -0.33
Trove2O08848 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trove2O08848 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13□□□□□ -0.33
Trove2O08848 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Trove2O08848 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trove2O08848 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trove2O08848 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trove2O08848 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Trove2O08848 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13□□□□□ -0.33
Trove2O08848 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13□□□□□ -0.33
Trove2O08848 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13□□□□□ -0.33
Trove2O08848 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trove2O08848 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Trove2O08848 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trove2O08848 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trove2O08848 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trove2O08848 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trove2O08848 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trove2O08848 Gm10110-202ENSMUST00000228705 3220 ntBASIC13□□□□□ -0.33
Trove2O08848 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trove2O08848 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trove2O08848 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.99□□□□□ -0.33
Trove2O08848 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trove2O08848 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trove2O08848 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trove2O08848 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trove2O08848 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trove2O08848 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trove2O08848 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trove2O08848 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trove2O08848 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trove2O08848 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trove2O08848 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trove2O08848 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trove2O08848 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trove2O08848 Gm7488-201ENSMUST00000117148 684 ntBASIC12.99□□□□□ -0.33
Trove2O08848 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Trove2O08848 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.99□□□□□ -0.33
Trove2O08848 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trove2O08848 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trove2O08848 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.99□□□□□ -0.33
Trove2O08848 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.99□□□□□ -0.33
Trove2O08848 Gm5866-201ENSMUST00000177881 973 ntBASIC12.99□□□□□ -0.33
Trove2O08848 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trove2O08848 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.99□□□□□ -0.33
Trove2O08848 Gm42550-201ENSMUST00000201553 960 ntBASIC12.99□□□□□ -0.33
Trove2O08848 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trove2O08848 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.99□□□□□ -0.33
Trove2O08848 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.99□□□□□ -0.33
Trove2O08848 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.99□□□□□ -0.33
Trove2O08848 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trove2O08848 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trove2O08848 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Trove2O08848 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trove2O08848 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.99□□□□□ -0.33
Trove2O08848 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trove2O08848 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trove2O08848 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trove2O08848 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trove2O08848 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trove2O08848 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trove2O08848 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.99□□□□□ -0.33
Trove2O08848 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trove2O08848 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trove2O08848 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trove2O08848 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trove2O08848 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trove2O08848 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trove2O08848 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trove2O08848 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trove2O08848 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trove2O08848 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trove2O08848 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trove2O08848 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trove2O08848 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.98□□□□□ -0.33
Trove2O08848 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.98□□□□□ -0.33
Trove2O08848 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trove2O08848 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trove2O08848 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trove2O08848 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms