Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Gm26035-201ENSMUST00000083065 308 ntBASIC12.98□□□□□ -0.33
Atf6F6VAN0 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atf6F6VAN0 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atf6F6VAN0 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Atf6F6VAN0 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atf6F6VAN0 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atf6F6VAN0 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atf6F6VAN0 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.98□□□□□ -0.33
Atf6F6VAN0 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
Atf6F6VAN0 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Atf6F6VAN0 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Atf6F6VAN0 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Atf6F6VAN0 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Atf6F6VAN0 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atf6F6VAN0 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Atf6F6VAN0 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atf6F6VAN0 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.97□□□□□ -0.33
Atf6F6VAN0 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.97□□□□□ -0.33
Atf6F6VAN0 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.97□□□□□ -0.33
Atf6F6VAN0 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atf6F6VAN0 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Atf6F6VAN0 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atf6F6VAN0 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atf6F6VAN0 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atf6F6VAN0 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atf6F6VAN0 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Atf6F6VAN0 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.97□□□□□ -0.33
Atf6F6VAN0 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.97□□□□□ -0.33
Atf6F6VAN0 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Atf6F6VAN0 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Atf6F6VAN0 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Atf6F6VAN0 Gm5745-201ENSMUST00000183748 313 ntBASIC12.97□□□□□ -0.33
Atf6F6VAN0 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.97□□□□□ -0.33
Atf6F6VAN0 Gm6266-201ENSMUST00000203844 806 ntBASIC12.97□□□□□ -0.33
Atf6F6VAN0 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.97□□□□□ -0.33
Atf6F6VAN0 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Atf6F6VAN0 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atf6F6VAN0 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
Atf6F6VAN0 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atf6F6VAN0 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.97□□□□□ -0.33
Atf6F6VAN0 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atf6F6VAN0 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atf6F6VAN0 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atf6F6VAN0 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atf6F6VAN0 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atf6F6VAN0 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atf6F6VAN0 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.97□□□□□ -0.33
Atf6F6VAN0 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atf6F6VAN0 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atf6F6VAN0 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Atf6F6VAN0 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atf6F6VAN0 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Atf6F6VAN0 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Atf6F6VAN0 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Atf6F6VAN0 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.96□□□□□ -0.33
Atf6F6VAN0 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Atf6F6VAN0 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Atf6F6VAN0 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Atf6F6VAN0 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Atf6F6VAN0 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Atf6F6VAN0 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Atf6F6VAN0 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Atf6F6VAN0 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Atf6F6VAN0 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Atf6F6VAN0 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Atf6F6VAN0 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.96□□□□□ -0.33
Atf6F6VAN0 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Atf6F6VAN0 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Atf6F6VAN0 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.96□□□□□ -0.33
Atf6F6VAN0 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Atf6F6VAN0 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Atf6F6VAN0 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Atf6F6VAN0 Gm16296-201ENSMUST00000159905 325 ntBASIC12.96□□□□□ -0.33
Atf6F6VAN0 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Atf6F6VAN0 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.96□□□□□ -0.33
Atf6F6VAN0 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.96□□□□□ -0.33
Atf6F6VAN0 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.96□□□□□ -0.33
Atf6F6VAN0 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.96□□□□□ -0.33
Atf6F6VAN0 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.96□□□□□ -0.33
Atf6F6VAN0 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.96□□□□□ -0.33
Atf6F6VAN0 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.96□□□□□ -0.33
Atf6F6VAN0 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Atf6F6VAN0 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.96□□□□□ -0.33
Atf6F6VAN0 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Atf6F6VAN0 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Atf6F6VAN0 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.33
Atf6F6VAN0 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Atf6F6VAN0 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.96□□□□□ -0.34
Atf6F6VAN0 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Atf6F6VAN0 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Atf6F6VAN0 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Atf6F6VAN0 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Atf6F6VAN0 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Atf6F6VAN0 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Atf6F6VAN0 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Atf6F6VAN0 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.95□□□□□ -0.34
Atf6F6VAN0 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Atf6F6VAN0 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Atf6F6VAN0 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.95□□□□□ -0.34
Atf6F6VAN0 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms