Protein–RNA interactions for Protein: F6U473

Gm28305, Predicted gene 28305 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28305F6U473 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Gm28305F6U473 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Gm28305F6U473 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Gm28305F6U473 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Gm28305F6U473 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC9.19□□□□□ -0.94
Gm28305F6U473 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Gm28305F6U473 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Gm28305F6U473 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Gm28305F6U473 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC9.19□□□□□ -0.94
Gm28305F6U473 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Gm28305F6U473 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Gm28305F6U473 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Gm28305F6U473 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Gm28305F6U473 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Gm28305F6U473 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Gm28305F6U473 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Gm28305F6U473 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Gm28305F6U473 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Gm28305F6U473 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Gm28305F6U473 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC9.18□□□□□ -0.94
Gm28305F6U473 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Gm28305F6U473 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Gm28305F6U473 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Gm28305F6U473 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Gm28305F6U473 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Gm28305F6U473 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Gm28305F6U473 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Gm28305F6U473 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Gm28305F6U473 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Gm28305F6U473 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Gm28305F6U473 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
Gm28305F6U473 Gm9385-201ENSMUST00000117563 472 ntBASIC9.18□□□□□ -0.94
Gm28305F6U473 Gm11543-201ENSMUST00000120758 370 ntBASIC9.18□□□□□ -0.94
Gm28305F6U473 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Gm28305F6U473 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC9.18□□□□□ -0.94
Gm28305F6U473 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Gm28305F6U473 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC9.18□□□□□ -0.94
Gm28305F6U473 Ighv8-7-201ENSMUST00000194349 297 ntBASIC9.18□□□□□ -0.94
Gm28305F6U473 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Gm28305F6U473 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Gm28305F6U473 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Gm28305F6U473 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Gm28305F6U473 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Gm28305F6U473 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Gm28305F6U473 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Gm28305F6U473 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Gm28305F6U473 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Gm28305F6U473 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Gm28305F6U473 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Gm28305F6U473 Armc2-201ENSMUST00000095729 4855 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Gm28305F6U473 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Gm28305F6U473 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Gm28305F6U473 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Gm28305F6U473 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Gm28305F6U473 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Gm28305F6U473 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Gm28305F6U473 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Gm28305F6U473 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Gm28305F6U473 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Gm28305F6U473 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Gm28305F6U473 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Gm28305F6U473 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Gm28305F6U473 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Gm28305F6U473 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Gm28305F6U473 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Gm28305F6U473 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Gm28305F6U473 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Gm28305F6U473 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Gm28305F6U473 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC9.17□□□□□ -0.94
Gm28305F6U473 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC9.17□□□□□ -0.94
Gm28305F6U473 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Gm28305F6U473 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC9.17□□□□□ -0.94
Gm28305F6U473 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Gm28305F6U473 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Gm28305F6U473 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Gm28305F6U473 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Gm28305F6U473 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Gm28305F6U473 Gm18856-201ENSMUST00000178096 1374 ntBASIC9.17□□□□□ -0.94
Gm28305F6U473 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Gm28305F6U473 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Gm28305F6U473 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC9.17□□□□□ -0.94
Gm28305F6U473 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Gm28305F6U473 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Gm28305F6U473 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC9.17□□□□□ -0.94
Gm28305F6U473 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Gm28305F6U473 Gm5638-201ENSMUST00000118618 1258 ntBASIC9.17□□□□□ -0.94
Gm28305F6U473 Gm9630-201ENSMUST00000178304 885 ntBASIC9.17□□□□□ -0.94
Gm28305F6U473 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Gm28305F6U473 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC9.17□□□□□ -0.94
Gm28305F6U473 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Gm28305F6U473 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC9.17□□□□□ -0.94
Gm28305F6U473 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC9.17□□□□□ -0.94
Gm28305F6U473 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Gm28305F6U473 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Gm28305F6U473 AC169036.1-201ENSMUST00000227994 296 ntBASIC9.17□□□□□ -0.94
Gm28305F6U473 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Gm28305F6U473 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Gm28305F6U473 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Gm28305F6U473 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Gm28305F6U473 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC9.17□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms