Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cpsf4lE9Q2N0 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cpsf4lE9Q2N0 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cpsf4lE9Q2N0 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cpsf4lE9Q2N0 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cpsf4lE9Q2N0 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cpsf4lE9Q2N0 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Cpsf4lE9Q2N0 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Cpsf4lE9Q2N0 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cpsf4lE9Q2N0 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Cpsf4lE9Q2N0 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cpsf4lE9Q2N0 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Cpsf4lE9Q2N0 Gm24231-201ENSMUST00000104315 133 ntBASIC10.69□□□□□ -0.7
Cpsf4lE9Q2N0 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cpsf4lE9Q2N0 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cpsf4lE9Q2N0 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cpsf4lE9Q2N0 Gm13316-201ENSMUST00000140537 691 ntBASIC10.69□□□□□ -0.7
Cpsf4lE9Q2N0 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cpsf4lE9Q2N0 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC10.69□□□□□ -0.7
Cpsf4lE9Q2N0 Rmrp-201ENSMUST00000157463 271 ntBASIC10.69□□□□□ -0.7
Cpsf4lE9Q2N0 Gm8018-201ENSMUST00000173536 789 ntBASIC10.69□□□□□ -0.7
Cpsf4lE9Q2N0 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
Cpsf4lE9Q2N0 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cpsf4lE9Q2N0 Gm44405-201ENSMUST00000198952 126 ntBASIC10.69□□□□□ -0.7
Cpsf4lE9Q2N0 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Cpsf4lE9Q2N0 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC10.69□□□□□ -0.7
Cpsf4lE9Q2N0 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC10.69□□□□□ -0.7
Cpsf4lE9Q2N0 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC10.69□□□□□ -0.7
Cpsf4lE9Q2N0 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cpsf4lE9Q2N0 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC10.69□□□□□ -0.7
Cpsf4lE9Q2N0 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cpsf4lE9Q2N0 AL732506.1-201ENSMUST00000226420 281 ntBASIC10.69□□□□□ -0.7
Cpsf4lE9Q2N0 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cpsf4lE9Q2N0 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cpsf4lE9Q2N0 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cpsf4lE9Q2N0 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cpsf4lE9Q2N0 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cpsf4lE9Q2N0 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC10.69□□□□□ -0.7
Cpsf4lE9Q2N0 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cpsf4lE9Q2N0 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cpsf4lE9Q2N0 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cpsf4lE9Q2N0 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Cpsf4lE9Q2N0 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cpsf4lE9Q2N0 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cpsf4lE9Q2N0 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cpsf4lE9Q2N0 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Cpsf4lE9Q2N0 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cpsf4lE9Q2N0 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cpsf4lE9Q2N0 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cpsf4lE9Q2N0 Gm17435-202ENSMUST00000212699 1998 ntBASIC10.68□□□□□ -0.7
Cpsf4lE9Q2N0 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cpsf4lE9Q2N0 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cpsf4lE9Q2N0 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cpsf4lE9Q2N0 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cpsf4lE9Q2N0 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Cpsf4lE9Q2N0 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cpsf4lE9Q2N0 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cpsf4lE9Q2N0 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cpsf4lE9Q2N0 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cpsf4lE9Q2N0 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cpsf4lE9Q2N0 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cpsf4lE9Q2N0 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Cpsf4lE9Q2N0 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cpsf4lE9Q2N0 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cpsf4lE9Q2N0 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cpsf4lE9Q2N0 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cpsf4lE9Q2N0 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC10.68□□□□□ -0.7
Cpsf4lE9Q2N0 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cpsf4lE9Q2N0 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cpsf4lE9Q2N0 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cpsf4lE9Q2N0 Gm11597-201ENSMUST00000121423 964 ntBASIC10.68□□□□□ -0.7
Cpsf4lE9Q2N0 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cpsf4lE9Q2N0 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.68□□□□□ -0.7
Cpsf4lE9Q2N0 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC10.68□□□□□ -0.7
Cpsf4lE9Q2N0 Gm43118-201ENSMUST00000199149 775 ntBASIC10.68□□□□□ -0.7
Cpsf4lE9Q2N0 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cpsf4lE9Q2N0 Gm45925-201ENSMUST00000218882 744 ntBASIC10.68□□□□□ -0.7
Cpsf4lE9Q2N0 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC10.68□□□□□ -0.7
Cpsf4lE9Q2N0 Gm45930-201ENSMUST00000221330 292 ntBASIC10.68□□□□□ -0.7
Cpsf4lE9Q2N0 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cpsf4lE9Q2N0 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Cpsf4lE9Q2N0 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cpsf4lE9Q2N0 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cpsf4lE9Q2N0 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cpsf4lE9Q2N0 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cpsf4lE9Q2N0 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC10.68□□□□□ -0.7
Cpsf4lE9Q2N0 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Cpsf4lE9Q2N0 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Cpsf4lE9Q2N0 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cpsf4lE9Q2N0 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cpsf4lE9Q2N0 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cpsf4lE9Q2N0 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cpsf4lE9Q2N0 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cpsf4lE9Q2N0 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cpsf4lE9Q2N0 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cpsf4lE9Q2N0 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cpsf4lE9Q2N0 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cpsf4lE9Q2N0 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cpsf4lE9Q2N0 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cpsf4lE9Q2N0 AC125108.1-201ENSMUST00000218986 2330 ntBASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms