Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scaf11E9PZM7 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scaf11E9PZM7 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scaf11E9PZM7 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Scaf11E9PZM7 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Scaf11E9PZM7 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC17.36■□□□□ 0.37
Scaf11E9PZM7 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scaf11E9PZM7 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Scaf11E9PZM7 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Scaf11E9PZM7 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scaf11E9PZM7 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scaf11E9PZM7 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scaf11E9PZM7 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC17.35■□□□□ 0.37
Scaf11E9PZM7 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Scaf11E9PZM7 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Scaf11E9PZM7 Gm26286-201ENSMUST00000104166 134 ntBASIC17.35■□□□□ 0.37
Scaf11E9PZM7 Gm13022-201ENSMUST00000121181 285 ntBASIC17.35■□□□□ 0.37
Scaf11E9PZM7 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Scaf11E9PZM7 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC17.35■□□□□ 0.37
Scaf11E9PZM7 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC17.35■□□□□ 0.37
Scaf11E9PZM7 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC17.35■□□□□ 0.37
Scaf11E9PZM7 Gm18059-201ENSMUST00000208073 580 ntBASIC17.35■□□□□ 0.37
Scaf11E9PZM7 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC17.35■□□□□ 0.37
Scaf11E9PZM7 AC165260.2-203ENSMUST00000224237 336 ntBASIC17.35■□□□□ 0.37
Scaf11E9PZM7 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Scaf11E9PZM7 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scaf11E9PZM7 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Scaf11E9PZM7 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scaf11E9PZM7 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Scaf11E9PZM7 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scaf11E9PZM7 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scaf11E9PZM7 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Scaf11E9PZM7 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Scaf11E9PZM7 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scaf11E9PZM7 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC17.34■□□□□ 0.37
Scaf11E9PZM7 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scaf11E9PZM7 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC17.34■□□□□ 0.37
Scaf11E9PZM7 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Scaf11E9PZM7 Gm26013-201ENSMUST00000104404 119 ntBASIC17.34■□□□□ 0.37
Scaf11E9PZM7 Mir874-201ENSMUST00000104769 76 ntBASIC17.34■□□□□ 0.37
Scaf11E9PZM7 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scaf11E9PZM7 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC17.34■□□□□ 0.37
Scaf11E9PZM7 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scaf11E9PZM7 Gm15744-201ENSMUST00000161734 213 ntBASIC17.34■□□□□ 0.37
Scaf11E9PZM7 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Scaf11E9PZM7 Gm6198-201ENSMUST00000191337 2929 ntBASIC17.34■□□□□ 0.37
Scaf11E9PZM7 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC17.34■□□□□ 0.37
Scaf11E9PZM7 Gm18204-201ENSMUST00000209835 793 ntBASIC17.34■□□□□ 0.37
Scaf11E9PZM7 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scaf11E9PZM7 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scaf11E9PZM7 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Scaf11E9PZM7 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scaf11E9PZM7 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scaf11E9PZM7 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scaf11E9PZM7 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Scaf11E9PZM7 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scaf11E9PZM7 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scaf11E9PZM7 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scaf11E9PZM7 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC17.34■□□□□ 0.37
Scaf11E9PZM7 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scaf11E9PZM7 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scaf11E9PZM7 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scaf11E9PZM7 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC17.33■□□□□ 0.37
Scaf11E9PZM7 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Scaf11E9PZM7 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scaf11E9PZM7 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scaf11E9PZM7 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scaf11E9PZM7 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC17.33■□□□□ 0.37
Scaf11E9PZM7 Gm44401-201ENSMUST00000204462 2375 ntBASIC17.33■□□□□ 0.37
Scaf11E9PZM7 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scaf11E9PZM7 Gm13328-201ENSMUST00000120816 1020 ntBASIC17.33■□□□□ 0.37
Scaf11E9PZM7 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC17.33■□□□□ 0.37
Scaf11E9PZM7 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
Scaf11E9PZM7 Gm8531-201ENSMUST00000188319 893 ntBASIC17.33■□□□□ 0.37
Scaf11E9PZM7 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC17.33■□□□□ 0.37
Scaf11E9PZM7 Gm18463-201ENSMUST00000207258 474 ntBASIC17.33■□□□□ 0.37
Scaf11E9PZM7 AC166344.1-201ENSMUST00000223745 674 ntBASIC17.33■□□□□ 0.37
Scaf11E9PZM7 AC115122.1-201ENSMUST00000224850 1040 ntBASIC17.33■□□□□ 0.37
Scaf11E9PZM7 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC17.33■□□□□ 0.37
Scaf11E9PZM7 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Scaf11E9PZM7 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Scaf11E9PZM7 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scaf11E9PZM7 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scaf11E9PZM7 Gm37859-201ENSMUST00000195529 2173 ntBASIC17.33■□□□□ 0.36
Scaf11E9PZM7 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Scaf11E9PZM7 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Scaf11E9PZM7 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scaf11E9PZM7 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scaf11E9PZM7 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scaf11E9PZM7 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Scaf11E9PZM7 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scaf11E9PZM7 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scaf11E9PZM7 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Scaf11E9PZM7 Gm15784-201ENSMUST00000120260 1462 ntBASIC17.33■□□□□ 0.36
Scaf11E9PZM7 Gm5939-201ENSMUST00000119613 2874 ntBASIC17.33■□□□□ 0.36
Scaf11E9PZM7 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
Scaf11E9PZM7 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Scaf11E9PZM7 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scaf11E9PZM7 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Scaf11E9PZM7 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms