Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 Matn2-206ENSMUST00000228570 2798 ntBASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 Gm9791-201ENSMUST00000060997 447 ntBASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a3E9PWQ3 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Col6a3E9PWQ3 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Col6a3E9PWQ3 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC12.25□□□□□ -0.45
Col6a3E9PWQ3 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Col6a3E9PWQ3 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Col6a3E9PWQ3 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a3E9PWQ3 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.25□□□□□ -0.45
Col6a3E9PWQ3 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a3E9PWQ3 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a3E9PWQ3 CT025618.1-201ENSMUST00000227409 1279 ntBASIC12.25□□□□□ -0.45
Col6a3E9PWQ3 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a3E9PWQ3 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a3E9PWQ3 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a3E9PWQ3 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a3E9PWQ3 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a3E9PWQ3 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a3E9PWQ3 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a3E9PWQ3 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a3E9PWQ3 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a3E9PWQ3 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.25□□□□□ -0.45
Col6a3E9PWQ3 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a3E9PWQ3 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.25□□□□□ -0.45
Col6a3E9PWQ3 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a3E9PWQ3 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC12.25□□□□□ -0.45
Col6a3E9PWQ3 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC12.25□□□□□ -0.45
Col6a3E9PWQ3 Ighv5-1-201ENSMUST00000193324 353 ntBASIC12.25□□□□□ -0.45
Col6a3E9PWQ3 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.25□□□□□ -0.45
Col6a3E9PWQ3 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a3E9PWQ3 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a3E9PWQ3 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a3E9PWQ3 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a3E9PWQ3 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a3E9PWQ3 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a3E9PWQ3 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a3E9PWQ3 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a3E9PWQ3 Capns1-202ENSMUST00000108196 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a3E9PWQ3 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a3E9PWQ3 Gm7242-201ENSMUST00000221134 705 ntBASIC12.24□□□□□ -0.45
Col6a3E9PWQ3 Olfr761-201ENSMUST00000049620 1029 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Col6a3E9PWQ3 Olfr127-201ENSMUST00000076331 1095 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Col6a3E9PWQ3 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a3E9PWQ3 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a3E9PWQ3 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a3E9PWQ3 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.24□□□□□ -0.45
Col6a3E9PWQ3 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.24□□□□□ -0.45
Col6a3E9PWQ3 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Col6a3E9PWQ3 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a3E9PWQ3 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a3E9PWQ3 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a3E9PWQ3 Gm24934-201ENSMUST00000103764 111 ntBASIC12.24□□□□□ -0.45
Col6a3E9PWQ3 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC12.24□□□□□ -0.45
Col6a3E9PWQ3 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a3E9PWQ3 Gm8226-201ENSMUST00000190511 798 ntBASIC12.24□□□□□ -0.45
Col6a3E9PWQ3 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a3E9PWQ3 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC12.24□□□□□ -0.45
Col6a3E9PWQ3 AC154477.1-201ENSMUST00000226515 773 ntBASIC12.24□□□□□ -0.45
Col6a3E9PWQ3 AC137842.2-201ENSMUST00000227734 797 ntBASIC12.24□□□□□ -0.45
Col6a3E9PWQ3 Gm4978-201ENSMUST00000071565 801 ntBASIC12.24□□□□□ -0.45
Col6a3E9PWQ3 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a3E9PWQ3 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a3E9PWQ3 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a3E9PWQ3 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a3E9PWQ3 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.24□□□□□ -0.45
Col6a3E9PWQ3 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Col6a3E9PWQ3 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Col6a3E9PWQ3 Gm15519-201ENSMUST00000120088 1566 ntBASIC12.24□□□□□ -0.45
Col6a3E9PWQ3 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a3E9PWQ3 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a3E9PWQ3 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a3E9PWQ3 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC12.24□□□□□ -0.45
Col6a3E9PWQ3 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a3E9PWQ3 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a3E9PWQ3 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a3E9PWQ3 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a3E9PWQ3 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Col6a3E9PWQ3 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a3E9PWQ3 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a3E9PWQ3 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a3E9PWQ3 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a3E9PWQ3 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a3E9PWQ3 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a3E9PWQ3 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a3E9PWQ3 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a3E9PWQ3 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a3E9PWQ3 Gm9797-202ENSMUST00000218003 294 ntBASIC12.23□□□□□ -0.45
Col6a3E9PWQ3 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms