Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Dchs1E9PVD3 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Dchs1E9PVD3 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Dchs1E9PVD3 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Dchs1E9PVD3 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC10.9□□□□□ -0.67
Dchs1E9PVD3 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Dchs1E9PVD3 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Dchs1E9PVD3 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Dchs1E9PVD3 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Dchs1E9PVD3 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Dchs1E9PVD3 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Dchs1E9PVD3 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.89□□□□□ -0.67
Dchs1E9PVD3 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Dchs1E9PVD3 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Dchs1E9PVD3 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC10.89□□□□□ -0.67
Dchs1E9PVD3 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Dchs1E9PVD3 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Dchs1E9PVD3 Gm43677-201ENSMUST00000198098 2378 ntBASIC10.89□□□□□ -0.67
Dchs1E9PVD3 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Dchs1E9PVD3 Gm15703-201ENSMUST00000120250 880 ntBASIC10.89□□□□□ -0.67
Dchs1E9PVD3 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC10.89□□□□□ -0.67
Dchs1E9PVD3 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC10.89□□□□□ -0.67
Dchs1E9PVD3 Gm17831-201ENSMUST00000205579 900 ntBASIC10.89□□□□□ -0.67
Dchs1E9PVD3 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC10.89□□□□□ -0.67
Dchs1E9PVD3 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Dchs1E9PVD3 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Dchs1E9PVD3 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Dchs1E9PVD3 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Dchs1E9PVD3 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Dchs1E9PVD3 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Dchs1E9PVD3 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Dchs1E9PVD3 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Dchs1E9PVD3 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Dchs1E9PVD3 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Dchs1E9PVD3 Gm12516-201ENSMUST00000120819 385 ntBASIC10.89□□□□□ -0.67
Dchs1E9PVD3 Gm12164-201ENSMUST00000121695 551 ntBASIC10.89□□□□□ -0.67
Dchs1E9PVD3 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Dchs1E9PVD3 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Dchs1E9PVD3 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC10.89□□□□□ -0.67
Dchs1E9PVD3 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Dchs1E9PVD3 Gm18304-201ENSMUST00000189162 546 ntBASIC10.89□□□□□ -0.67
Dchs1E9PVD3 Gm5100-201ENSMUST00000195631 589 ntBASIC10.89□□□□□ -0.67
Dchs1E9PVD3 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Dchs1E9PVD3 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Dchs1E9PVD3 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Dchs1E9PVD3 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Dchs1E9PVD3 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Dchs1E9PVD3 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Dchs1E9PVD3 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Dchs1E9PVD3 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Dchs1E9PVD3 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Dchs1E9PVD3 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Dchs1E9PVD3 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Dchs1E9PVD3 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Dchs1E9PVD3 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC10.89□□□□□ -0.67
Dchs1E9PVD3 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Dchs1E9PVD3 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC10.89□□□□□ -0.67
Dchs1E9PVD3 Gm807-202ENSMUST00000224929 408 ntBASIC10.89□□□□□ -0.67
Dchs1E9PVD3 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC10.89□□□□□ -0.67
Dchs1E9PVD3 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Dchs1E9PVD3 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
Dchs1E9PVD3 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Dchs1E9PVD3 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Dchs1E9PVD3 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Dchs1E9PVD3 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Dchs1E9PVD3 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Dchs1E9PVD3 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC10.88□□□□□ -0.67
Dchs1E9PVD3 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Dchs1E9PVD3 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Dchs1E9PVD3 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Dchs1E9PVD3 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Dchs1E9PVD3 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Dchs1E9PVD3 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC10.88□□□□□ -0.67
Dchs1E9PVD3 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC10.88□□□□□ -0.67
Dchs1E9PVD3 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC10.88□□□□□ -0.67
Dchs1E9PVD3 Cd63-ps-202ENSMUST00000154992 717 ntBASIC10.88□□□□□ -0.67
Dchs1E9PVD3 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Dchs1E9PVD3 Gm3332-201ENSMUST00000189337 928 ntBASIC10.88□□□□□ -0.67
Dchs1E9PVD3 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Dchs1E9PVD3 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC10.88□□□□□ -0.67
Dchs1E9PVD3 Ap3s1-202ENSMUST00000224622 978 ntBASIC10.88□□□□□ -0.67
Dchs1E9PVD3 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Dchs1E9PVD3 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Dchs1E9PVD3 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Dchs1E9PVD3 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Dchs1E9PVD3 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Dchs1E9PVD3 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Dchs1E9PVD3 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Dchs1E9PVD3 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC10.88□□□□□ -0.67
Dchs1E9PVD3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Dchs1E9PVD3 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC10.88□□□□□ -0.67
Dchs1E9PVD3 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Dchs1E9PVD3 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Dchs1E9PVD3 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Dchs1E9PVD3 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.88□□□□□ -0.67
Dchs1E9PVD3 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Dchs1E9PVD3 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Dchs1E9PVD3 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC10.88□□□□□ -0.67
Dchs1E9PVD3 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC10.88□□□□□ -0.67
Dchs1E9PVD3 Gm8199-201ENSMUST00000121323 823 ntBASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms