Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3543D3Z235 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Gm3543D3Z235 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3543D3Z235 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.48□□□□□ -0.57
Gm3543D3Z235 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3543D3Z235 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Gm3543D3Z235 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3543D3Z235 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.48□□□□□ -0.57
Gm3543D3Z235 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.48□□□□□ -0.57
Gm3543D3Z235 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Gm3543D3Z235 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3543D3Z235 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3543D3Z235 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3543D3Z235 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3543D3Z235 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3543D3Z235 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.47□□□□□ -0.57
Gm3543D3Z235 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3543D3Z235 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3543D3Z235 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.47□□□□□ -0.57
Gm3543D3Z235 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3543D3Z235 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Gm3543D3Z235 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3543D3Z235 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.47□□□□□ -0.57
Gm3543D3Z235 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.47□□□□□ -0.57
Gm3543D3Z235 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3543D3Z235 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.47□□□□□ -0.57
Gm3543D3Z235 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3543D3Z235 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3543D3Z235 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3543D3Z235 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3543D3Z235 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3543D3Z235 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3543D3Z235 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Gm3543D3Z235 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Gm3543D3Z235 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.47□□□□□ -0.57
Gm3543D3Z235 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3543D3Z235 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.47□□□□□ -0.57
Gm3543D3Z235 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.47□□□□□ -0.57
Gm3543D3Z235 Gm38002-201ENSMUST00000193255 180 ntBASIC11.47□□□□□ -0.57
Gm3543D3Z235 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.47□□□□□ -0.57
Gm3543D3Z235 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC11.47□□□□□ -0.57
Gm3543D3Z235 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.47□□□□□ -0.57
Gm3543D3Z235 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3543D3Z235 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3543D3Z235 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3543D3Z235 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3543D3Z235 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3543D3Z235 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Gm3543D3Z235 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3543D3Z235 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Gm3543D3Z235 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3543D3Z235 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3543D3Z235 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Gm3543D3Z235 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.47□□□□□ -0.57
Gm3543D3Z235 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3543D3Z235 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3543D3Z235 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3543D3Z235 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3543D3Z235 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3543D3Z235 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3543D3Z235 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3543D3Z235 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3543D3Z235 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gm3543D3Z235 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.46□□□□□ -0.57
Gm3543D3Z235 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.46□□□□□ -0.57
Gm3543D3Z235 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gm3543D3Z235 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gm3543D3Z235 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.46□□□□□ -0.57
Gm3543D3Z235 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
Gm3543D3Z235 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Gm3543D3Z235 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Gm3543D3Z235 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Gm3543D3Z235 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Gm3543D3Z235 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.46□□□□□ -0.57
Gm3543D3Z235 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.46□□□□□ -0.57
Gm3543D3Z235 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gm3543D3Z235 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gm3543D3Z235 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Gm3543D3Z235 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gm3543D3Z235 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.46□□□□□ -0.57
Gm3543D3Z235 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.46□□□□□ -0.57
Gm3543D3Z235 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.46□□□□□ -0.57
Gm3543D3Z235 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gm3543D3Z235 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Gm3543D3Z235 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.46□□□□□ -0.57
Gm3543D3Z235 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Gm3543D3Z235 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Gm3543D3Z235 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Gm3543D3Z235 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.46□□□□□ -0.57
Gm3543D3Z235 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Gm3543D3Z235 Gm18054-201ENSMUST00000207539 555 ntBASIC11.46□□□□□ -0.57
Gm3543D3Z235 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.46□□□□□ -0.57
Gm3543D3Z235 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.46□□□□□ -0.57
Gm3543D3Z235 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Gm3543D3Z235 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.46□□□□□ -0.57
Gm3543D3Z235 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Gm3543D3Z235 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gm3543D3Z235 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.46□□□□□ -0.57
Gm3543D3Z235 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gm3543D3Z235 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms