Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 Gm12539-201ENSMUST00000121549 1098 ntBASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 Gm38114-201ENSMUST00000191877 1232 ntBASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 Gm8515-201ENSMUST00000194852 576 ntBASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 Gtpbp10-211ENSMUST00000198799 648 ntBASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 Gm8463-201ENSMUST00000208573 613 ntBASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 AC150560.1-201ENSMUST00000227731 1187 ntBASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 AL645783.1-201ENSMUST00000221416 1832 ntBASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 AC101945.2-201ENSMUST00000227886 1377 ntBASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.62□□□□□ -0.71
Trav5-4A0A075B652 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5-4A0A075B652 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5-4A0A075B652 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5-4A0A075B652 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Trav5-4A0A075B652 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Trav5-4A0A075B652 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC10.61□□□□□ -0.71
Trav5-4A0A075B652 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5-4A0A075B652 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Trav5-4A0A075B652 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5-4A0A075B652 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5-4A0A075B652 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5-4A0A075B652 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav5-4A0A075B652 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5-4A0A075B652 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5-4A0A075B652 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5-4A0A075B652 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5-4A0A075B652 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5-4A0A075B652 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5-4A0A075B652 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Trav5-4A0A075B652 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC10.61□□□□□ -0.71
Trav5-4A0A075B652 Gm14928-201ENSMUST00000120198 477 ntBASIC10.61□□□□□ -0.71
Trav5-4A0A075B652 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC10.61□□□□□ -0.71
Trav5-4A0A075B652 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Trav5-4A0A075B652 Gm9061-201ENSMUST00000182707 1006 ntBASIC10.61□□□□□ -0.71
Trav5-4A0A075B652 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC10.61□□□□□ -0.71
Trav5-4A0A075B652 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5-4A0A075B652 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav5-4A0A075B652 AC162801.1-201ENSMUST00000220612 198 ntBASIC10.61□□□□□ -0.71
Trav5-4A0A075B652 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5-4A0A075B652 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5-4A0A075B652 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5-4A0A075B652 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5-4A0A075B652 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5-4A0A075B652 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Trav5-4A0A075B652 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Trav5-4A0A075B652 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5-4A0A075B652 Gm38049-201ENSMUST00000195698 1372 ntBASIC10.61□□□□□ -0.71
Trav5-4A0A075B652 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Trav5-4A0A075B652 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5-4A0A075B652 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5-4A0A075B652 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5-4A0A075B652 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5-4A0A075B652 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5-4A0A075B652 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5-4A0A075B652 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.61□□□□□ -0.71
Trav5-4A0A075B652 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Trav5-4A0A075B652 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC10.61□□□□□ -0.71
Trav5-4A0A075B652 Rnf17-202ENSMUST00000223627 2077 ntBASIC10.61□□□□□ -0.71
Trav5-4A0A075B652 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5-4A0A075B652 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 Gm9115-201ENSMUST00000120192 1348 ntBASIC10.6□□□□□ -0.71
Trav5-4A0A075B652 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms