Protein–RNA interactions for Protein: Q9Z140

Cpne6, Copine-6, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne6Q9Z140 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpne6Q9Z140 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cpne6Q9Z140 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Cpne6Q9Z140 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Cpne6Q9Z140 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpne6Q9Z140 Gm13316-201ENSMUST00000140537 691 ntBASIC12.33□□□□□ -0.44
Cpne6Q9Z140 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cpne6Q9Z140 Gm17376-201ENSMUST00000166016 84 ntBASIC12.33□□□□□ -0.44
Cpne6Q9Z140 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Cpne6Q9Z140 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpne6Q9Z140 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.33□□□□□ -0.44
Cpne6Q9Z140 Gm8099-201ENSMUST00000200510 742 ntBASIC12.33□□□□□ -0.44
Cpne6Q9Z140 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.33□□□□□ -0.44
Cpne6Q9Z140 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.33□□□□□ -0.44
Cpne6Q9Z140 Gm6082-201ENSMUST00000215204 454 ntBASIC12.33□□□□□ -0.44
Cpne6Q9Z140 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cpne6Q9Z140 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpne6Q9Z140 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpne6Q9Z140 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Cpne6Q9Z140 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpne6Q9Z140 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Cpne6Q9Z140 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpne6Q9Z140 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpne6Q9Z140 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpne6Q9Z140 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpne6Q9Z140 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpne6Q9Z140 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cpne6Q9Z140 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.33□□□□□ -0.44
Cpne6Q9Z140 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpne6Q9Z140 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpne6Q9Z140 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpne6Q9Z140 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.33□□□□□ -0.44
Cpne6Q9Z140 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.33□□□□□ -0.44
Cpne6Q9Z140 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne6Q9Z140 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne6Q9Z140 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne6Q9Z140 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne6Q9Z140 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne6Q9Z140 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.32□□□□□ -0.44
Cpne6Q9Z140 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne6Q9Z140 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Cpne6Q9Z140 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.32□□□□□ -0.44
Cpne6Q9Z140 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne6Q9Z140 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Cpne6Q9Z140 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne6Q9Z140 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne6Q9Z140 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne6Q9Z140 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne6Q9Z140 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne6Q9Z140 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.32□□□□□ -0.44
Cpne6Q9Z140 Snord83b-201ENSMUST00000104546 94 ntBASIC12.32□□□□□ -0.44
Cpne6Q9Z140 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne6Q9Z140 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cpne6Q9Z140 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.32□□□□□ -0.44
Cpne6Q9Z140 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.32□□□□□ -0.44
Cpne6Q9Z140 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.32□□□□□ -0.44
Cpne6Q9Z140 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.32□□□□□ -0.44
Cpne6Q9Z140 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.32□□□□□ -0.44
Cpne6Q9Z140 Gm26956-201ENSMUST00000182176 986 ntBASIC12.32□□□□□ -0.44
Cpne6Q9Z140 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.32□□□□□ -0.44
Cpne6Q9Z140 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.32□□□□□ -0.44
Cpne6Q9Z140 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.32□□□□□ -0.44
Cpne6Q9Z140 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne6Q9Z140 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne6Q9Z140 Gm5904-201ENSMUST00000210286 865 ntBASIC12.32□□□□□ -0.44
Cpne6Q9Z140 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.32□□□□□ -0.44
Cpne6Q9Z140 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.32□□□□□ -0.44
Cpne6Q9Z140 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.32□□□□□ -0.44
Cpne6Q9Z140 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne6Q9Z140 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne6Q9Z140 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne6Q9Z140 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne6Q9Z140 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne6Q9Z140 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne6Q9Z140 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne6Q9Z140 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne6Q9Z140 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Cpne6Q9Z140 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne6Q9Z140 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne6Q9Z140 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne6Q9Z140 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cpne6Q9Z140 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpne6Q9Z140 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpne6Q9Z140 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpne6Q9Z140 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpne6Q9Z140 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpne6Q9Z140 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpne6Q9Z140 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.31□□□□□ -0.44
Cpne6Q9Z140 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.31□□□□□ -0.44
Cpne6Q9Z140 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpne6Q9Z140 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpne6Q9Z140 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Cpne6Q9Z140 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpne6Q9Z140 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cpne6Q9Z140 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.31□□□□□ -0.44
Cpne6Q9Z140 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cpne6Q9Z140 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpne6Q9Z140 Gm14704-201ENSMUST00000120300 874 ntBASIC12.31□□□□□ -0.44
Cpne6Q9Z140 Gm14726-201ENSMUST00000120623 896 ntBASIC12.31□□□□□ -0.44
Cpne6Q9Z140 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms