Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf40aQ9R1C7 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf40aQ9R1C7 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf40aQ9R1C7 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf40aQ9R1C7 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf40aQ9R1C7 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf40aQ9R1C7 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf40aQ9R1C7 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf40aQ9R1C7 Gm12291-201ENSMUST00000121627 311 ntBASIC13.95□□□□□ -0.18
Prpf40aQ9R1C7 Gm1335-201ENSMUST00000121653 386 ntBASIC13.95□□□□□ -0.18
Prpf40aQ9R1C7 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf40aQ9R1C7 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf40aQ9R1C7 Gm27731-201ENSMUST00000185192 107 ntBASIC13.95□□□□□ -0.18
Prpf40aQ9R1C7 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.95□□□□□ -0.18
Prpf40aQ9R1C7 Gm18062-201ENSMUST00000208020 547 ntBASIC13.95□□□□□ -0.18
Prpf40aQ9R1C7 Gm18055-201ENSMUST00000208254 547 ntBASIC13.95□□□□□ -0.18
Prpf40aQ9R1C7 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.95□□□□□ -0.18
Prpf40aQ9R1C7 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf40aQ9R1C7 Gm19163-201ENSMUST00000223313 780 ntBASIC13.95□□□□□ -0.18
Prpf40aQ9R1C7 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf40aQ9R1C7 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf40aQ9R1C7 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf40aQ9R1C7 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf40aQ9R1C7 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf40aQ9R1C7 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf40aQ9R1C7 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf40aQ9R1C7 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf40aQ9R1C7 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf40aQ9R1C7 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.95□□□□□ -0.18
Prpf40aQ9R1C7 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.95□□□□□ -0.18
Prpf40aQ9R1C7 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Prpf40aQ9R1C7 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf40aQ9R1C7 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.95□□□□□ -0.18
Prpf40aQ9R1C7 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prpf40aQ9R1C7 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.94□□□□□ -0.18
Prpf40aQ9R1C7 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.94□□□□□ -0.18
Prpf40aQ9R1C7 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf40aQ9R1C7 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf40aQ9R1C7 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf40aQ9R1C7 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.94□□□□□ -0.18
Prpf40aQ9R1C7 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.94□□□□□ -0.18
Prpf40aQ9R1C7 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf40aQ9R1C7 Gm14660-201ENSMUST00000119809 575 ntBASIC13.94□□□□□ -0.18
Prpf40aQ9R1C7 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.94□□□□□ -0.18
Prpf40aQ9R1C7 Gm17208-201ENSMUST00000168388 535 ntBASIC13.94□□□□□ -0.18
Prpf40aQ9R1C7 Gm7029-201ENSMUST00000173226 450 ntBASIC13.94□□□□□ -0.18
Prpf40aQ9R1C7 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.94□□□□□ -0.18
Prpf40aQ9R1C7 Gm8099-201ENSMUST00000200510 742 ntBASIC13.94□□□□□ -0.18
Prpf40aQ9R1C7 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC13.94□□□□□ -0.18
Prpf40aQ9R1C7 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf40aQ9R1C7 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.94□□□□□ -0.18
Prpf40aQ9R1C7 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf40aQ9R1C7 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Prpf40aQ9R1C7 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf40aQ9R1C7 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Prpf40aQ9R1C7 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Prpf40aQ9R1C7 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf40aQ9R1C7 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf40aQ9R1C7 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prpf40aQ9R1C7 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Prpf40aQ9R1C7 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Prpf40aQ9R1C7 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf40aQ9R1C7 Gm45251-201ENSMUST00000209486 1465 ntBASIC13.93□□□□□ -0.18
Prpf40aQ9R1C7 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf40aQ9R1C7 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Prpf40aQ9R1C7 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf40aQ9R1C7 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf40aQ9R1C7 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.93□□□□□ -0.18
Prpf40aQ9R1C7 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf40aQ9R1C7 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf40aQ9R1C7 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Prpf40aQ9R1C7 Gm43417-201ENSMUST00000201586 5207 ntBASIC13.93□□□□□ -0.18
Prpf40aQ9R1C7 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf40aQ9R1C7 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Prpf40aQ9R1C7 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
Prpf40aQ9R1C7 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Prpf40aQ9R1C7 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf40aQ9R1C7 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf40aQ9R1C7 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf40aQ9R1C7 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf40aQ9R1C7 Gm11425-201ENSMUST00000119608 498 ntBASIC13.93□□□□□ -0.18
Prpf40aQ9R1C7 Mir1982-201ENSMUST00000157368 74 ntBASIC13.93□□□□□ -0.18
Prpf40aQ9R1C7 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.93□□□□□ -0.18
Prpf40aQ9R1C7 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf40aQ9R1C7 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.93□□□□□ -0.18
Prpf40aQ9R1C7 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf40aQ9R1C7 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf40aQ9R1C7 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf40aQ9R1C7 Gm9396-201ENSMUST00000076703 567 ntBASIC13.93□□□□□ -0.18
Prpf40aQ9R1C7 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf40aQ9R1C7 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf40aQ9R1C7 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf40aQ9R1C7 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf40aQ9R1C7 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf40aQ9R1C7 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf40aQ9R1C7 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Prpf40aQ9R1C7 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf40aQ9R1C7 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf40aQ9R1C7 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf40aQ9R1C7 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms