Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AmfrQ9R049 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC14.17□□□□□ -0.14
AmfrQ9R049 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC14.17□□□□□ -0.14
AmfrQ9R049 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AmfrQ9R049 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AmfrQ9R049 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.17□□□□□ -0.14
AmfrQ9R049 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
AmfrQ9R049 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
AmfrQ9R049 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AmfrQ9R049 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AmfrQ9R049 Gm6458-201ENSMUST00000211573 635 ntBASIC14.17□□□□□ -0.14
AmfrQ9R049 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AmfrQ9R049 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
AmfrQ9R049 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AmfrQ9R049 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AmfrQ9R049 Gm38049-201ENSMUST00000195698 1372 ntBASIC14.17□□□□□ -0.14
AmfrQ9R049 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AmfrQ9R049 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AmfrQ9R049 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AmfrQ9R049 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AmfrQ9R049 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
AmfrQ9R049 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AmfrQ9R049 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
AmfrQ9R049 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AmfrQ9R049 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
AmfrQ9R049 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AmfrQ9R049 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AmfrQ9R049 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
AmfrQ9R049 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
AmfrQ9R049 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
AmfrQ9R049 Gm6210-201ENSMUST00000204734 1942 ntBASIC14.16□□□□□ -0.14
AmfrQ9R049 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
AmfrQ9R049 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AmfrQ9R049 Gm25261-201ENSMUST00000157416 134 ntBASIC14.16□□□□□ -0.14
AmfrQ9R049 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
AmfrQ9R049 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
AmfrQ9R049 AC154305.4-201ENSMUST00000224520 614 ntBASIC14.16□□□□□ -0.14
AmfrQ9R049 AC101945.2-201ENSMUST00000227886 1377 ntBASIC14.16□□□□□ -0.14
AmfrQ9R049 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AmfrQ9R049 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AmfrQ9R049 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
AmfrQ9R049 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
AmfrQ9R049 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
AmfrQ9R049 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
AmfrQ9R049 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AmfrQ9R049 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC14.15□□□□□ -0.14
AmfrQ9R049 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AmfrQ9R049 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
AmfrQ9R049 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC14.15□□□□□ -0.14
AmfrQ9R049 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
AmfrQ9R049 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AmfrQ9R049 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AmfrQ9R049 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC14.15□□□□□ -0.14
AmfrQ9R049 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
AmfrQ9R049 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AmfrQ9R049 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
AmfrQ9R049 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AmfrQ9R049 AC134254.1-201ENSMUST00000221362 167 ntBASIC14.15□□□□□ -0.14
AmfrQ9R049 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
AmfrQ9R049 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AmfrQ9R049 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
AmfrQ9R049 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AmfrQ9R049 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
AmfrQ9R049 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AmfrQ9R049 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AmfrQ9R049 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
AmfrQ9R049 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
AmfrQ9R049 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
AmfrQ9R049 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AmfrQ9R049 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AmfrQ9R049 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
AmfrQ9R049 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AmfrQ9R049 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AmfrQ9R049 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AmfrQ9R049 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
AmfrQ9R049 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
AmfrQ9R049 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC14.15□□□□□ -0.14
AmfrQ9R049 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AmfrQ9R049 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AmfrQ9R049 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
AmfrQ9R049 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC14.15□□□□□ -0.15
AmfrQ9R049 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
AmfrQ9R049 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
AmfrQ9R049 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
AmfrQ9R049 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC14.14□□□□□ -0.15
AmfrQ9R049 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AmfrQ9R049 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
AmfrQ9R049 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
AmfrQ9R049 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
AmfrQ9R049 Gm14608-201ENSMUST00000120030 1553 ntBASIC14.14□□□□□ -0.15
AmfrQ9R049 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AmfrQ9R049 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AmfrQ9R049 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
AmfrQ9R049 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AmfrQ9R049 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC14.14□□□□□ -0.15
AmfrQ9R049 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AmfrQ9R049 Gm44292-201ENSMUST00000205194 2364 ntBASIC14.14□□□□□ -0.15
AmfrQ9R049 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
AmfrQ9R049 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
AmfrQ9R049 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms