Protein–RNA interactions for Protein: Q9QXZ7

Nr2e3, Photoreceptor-specific nuclear receptor, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr2e3Q9QXZ7 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nr2e3Q9QXZ7 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nr2e3Q9QXZ7 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nr2e3Q9QXZ7 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nr2e3Q9QXZ7 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC14.3□□□□□ -0.12
Nr2e3Q9QXZ7 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nr2e3Q9QXZ7 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nr2e3Q9QXZ7 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nr2e3Q9QXZ7 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Nr2e3Q9QXZ7 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nr2e3Q9QXZ7 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nr2e3Q9QXZ7 Rnf17-202ENSMUST00000223627 2077 ntBASIC14.29□□□□□ -0.12
Nr2e3Q9QXZ7 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nr2e3Q9QXZ7 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nr2e3Q9QXZ7 Gm45266-201ENSMUST00000210111 2173 ntBASIC14.29□□□□□ -0.12
Nr2e3Q9QXZ7 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nr2e3Q9QXZ7 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nr2e3Q9QXZ7 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nr2e3Q9QXZ7 Gm13875-201ENSMUST00000120162 282 ntBASIC14.29□□□□□ -0.12
Nr2e3Q9QXZ7 Gm13315-201ENSMUST00000120376 991 ntBASIC14.29□□□□□ -0.12
Nr2e3Q9QXZ7 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Nr2e3Q9QXZ7 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
Nr2e3Q9QXZ7 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC14.29□□□□□ -0.12
Nr2e3Q9QXZ7 Gm29396-201ENSMUST00000185659 716 ntBASIC14.29□□□□□ -0.12
Nr2e3Q9QXZ7 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nr2e3Q9QXZ7 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC14.29□□□□□ -0.12
Nr2e3Q9QXZ7 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC14.29□□□□□ -0.12
Nr2e3Q9QXZ7 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC14.29□□□□□ -0.12
Nr2e3Q9QXZ7 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC14.29□□□□□ -0.12
Nr2e3Q9QXZ7 Gm7046-201ENSMUST00000221351 977 ntBASIC14.29□□□□□ -0.12
Nr2e3Q9QXZ7 Gm8227-201ENSMUST00000223306 571 ntBASIC14.29□□□□□ -0.12
Nr2e3Q9QXZ7 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nr2e3Q9QXZ7 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nr2e3Q9QXZ7 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nr2e3Q9QXZ7 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nr2e3Q9QXZ7 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Nr2e3Q9QXZ7 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nr2e3Q9QXZ7 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nr2e3Q9QXZ7 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nr2e3Q9QXZ7 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Nr2e3Q9QXZ7 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.29□□□□□ -0.12
Nr2e3Q9QXZ7 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Nr2e3Q9QXZ7 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Nr2e3Q9QXZ7 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nr2e3Q9QXZ7 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Nr2e3Q9QXZ7 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nr2e3Q9QXZ7 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nr2e3Q9QXZ7 Gm24231-201ENSMUST00000104315 133 ntBASIC14.28□□□□□ -0.12
Nr2e3Q9QXZ7 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nr2e3Q9QXZ7 Gm15370-201ENSMUST00000117158 253 ntBASIC14.28□□□□□ -0.12
Nr2e3Q9QXZ7 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC14.28□□□□□ -0.12
Nr2e3Q9QXZ7 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nr2e3Q9QXZ7 Rmrp-201ENSMUST00000157463 271 ntBASIC14.28□□□□□ -0.12
Nr2e3Q9QXZ7 Gm27516-201ENSMUST00000184237 98 ntBASIC14.28□□□□□ -0.12
Nr2e3Q9QXZ7 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.28□□□□□ -0.12
Nr2e3Q9QXZ7 Gm42853-201ENSMUST00000201273 1387 ntBASIC14.28□□□□□ -0.12
Nr2e3Q9QXZ7 Gm18935-201ENSMUST00000212692 664 ntBASIC14.28□□□□□ -0.12
Nr2e3Q9QXZ7 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Nr2e3Q9QXZ7 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nr2e3Q9QXZ7 AL732506.1-201ENSMUST00000226420 281 ntBASIC14.28□□□□□ -0.12
Nr2e3Q9QXZ7 AC169036.1-201ENSMUST00000227994 296 ntBASIC14.28□□□□□ -0.12
Nr2e3Q9QXZ7 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nr2e3Q9QXZ7 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nr2e3Q9QXZ7 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nr2e3Q9QXZ7 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nr2e3Q9QXZ7 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Nr2e3Q9QXZ7 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nr2e3Q9QXZ7 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nr2e3Q9QXZ7 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.28□□□□□ -0.12
Nr2e3Q9QXZ7 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nr2e3Q9QXZ7 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nr2e3Q9QXZ7 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nr2e3Q9QXZ7 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nr2e3Q9QXZ7 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nr2e3Q9QXZ7 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nr2e3Q9QXZ7 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nr2e3Q9QXZ7 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nr2e3Q9QXZ7 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nr2e3Q9QXZ7 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nr2e3Q9QXZ7 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nr2e3Q9QXZ7 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC14.27□□□□□ -0.12
Nr2e3Q9QXZ7 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nr2e3Q9QXZ7 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC14.27□□□□□ -0.12
Nr2e3Q9QXZ7 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nr2e3Q9QXZ7 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nr2e3Q9QXZ7 Gm10434-201ENSMUST00000101158 471 ntBASIC14.27□□□□□ -0.13
Nr2e3Q9QXZ7 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Nr2e3Q9QXZ7 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC14.27□□□□□ -0.13
Nr2e3Q9QXZ7 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC14.27□□□□□ -0.13
Nr2e3Q9QXZ7 Gm13297-201ENSMUST00000120205 934 ntBASIC14.27□□□□□ -0.13
Nr2e3Q9QXZ7 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nr2e3Q9QXZ7 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nr2e3Q9QXZ7 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nr2e3Q9QXZ7 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
Nr2e3Q9QXZ7 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Nr2e3Q9QXZ7 Mir8109-201ENSMUST00000184375 117 ntBASIC14.27□□□□□ -0.13
Nr2e3Q9QXZ7 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC14.27□□□□□ -0.13
Nr2e3Q9QXZ7 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nr2e3Q9QXZ7 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nr2e3Q9QXZ7 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms