Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cacna1fQ9JIS7 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1fQ9JIS7 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.17□□□□□ -0.14
Cacna1fQ9JIS7 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1fQ9JIS7 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1fQ9JIS7 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1fQ9JIS7 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1fQ9JIS7 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1fQ9JIS7 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1fQ9JIS7 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Cacna1fQ9JIS7 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC14.17□□□□□ -0.14
Cacna1fQ9JIS7 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1fQ9JIS7 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1fQ9JIS7 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Cacna1fQ9JIS7 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1fQ9JIS7 Rprl1-201ENSMUST00000158050 327 ntBASIC14.17□□□□□ -0.14
Cacna1fQ9JIS7 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Cacna1fQ9JIS7 Gm27438-201ENSMUST00000183480 110 ntBASIC14.17□□□□□ -0.14
Cacna1fQ9JIS7 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC14.17□□□□□ -0.14
Cacna1fQ9JIS7 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC14.17□□□□□ -0.14
Cacna1fQ9JIS7 Gm8956-201ENSMUST00000203939 825 ntBASIC14.17□□□□□ -0.14
Cacna1fQ9JIS7 AC141438.2-201ENSMUST00000215068 271 ntBASIC14.17□□□□□ -0.14
Cacna1fQ9JIS7 AC135114.1-201ENSMUST00000228682 270 ntBASIC14.17□□□□□ -0.14
Cacna1fQ9JIS7 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1fQ9JIS7 AC154262.2-202ENSMUST00000225158 1331 ntBASIC14.17□□□□□ -0.14
Cacna1fQ9JIS7 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC14.17□□□□□ -0.14
Cacna1fQ9JIS7 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Cacna1fQ9JIS7 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Cacna1fQ9JIS7 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 Gm37905-201ENSMUST00000195310 341 ntBASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 Gm28686-201ENSMUST00000187404 609 ntBASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 Gm44711-201ENSMUST00000205414 1264 ntBASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1fQ9JIS7 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC14.15□□□□□ -0.14
Cacna1fQ9JIS7 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1fQ9JIS7 Gm45643-201ENSMUST00000211364 1484 ntBASIC14.15□□□□□ -0.14
Cacna1fQ9JIS7 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1fQ9JIS7 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1fQ9JIS7 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC14.15□□□□□ -0.14
Cacna1fQ9JIS7 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC14.15□□□□□ -0.14
Cacna1fQ9JIS7 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1fQ9JIS7 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC14.15□□□□□ -0.14
Cacna1fQ9JIS7 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1fQ9JIS7 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1fQ9JIS7 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1fQ9JIS7 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1fQ9JIS7 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1fQ9JIS7 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Cacna1fQ9JIS7 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1fQ9JIS7 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cacna1fQ9JIS7 Grk6-205ENSMUST00000224653 2976 ntBASIC14.15□□□□□ -0.14
Cacna1fQ9JIS7 Gm5847-201ENSMUST00000178959 1595 ntBASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms