Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Gm4768-201ENSMUST00000206199 686 ntBASIC13.17□□□□□ -0.3
Cpne8Q9DC53 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.17□□□□□ -0.3
Cpne8Q9DC53 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne8Q9DC53 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne8Q9DC53 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne8Q9DC53 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne8Q9DC53 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne8Q9DC53 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne8Q9DC53 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne8Q9DC53 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne8Q9DC53 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne8Q9DC53 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
Cpne8Q9DC53 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.17□□□□□ -0.3
Cpne8Q9DC53 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne8Q9DC53 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne8Q9DC53 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Cpne8Q9DC53 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.17□□□□□ -0.3
Cpne8Q9DC53 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne8Q9DC53 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne8Q9DC53 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cpne8Q9DC53 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpne8Q9DC53 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpne8Q9DC53 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpne8Q9DC53 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpne8Q9DC53 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpne8Q9DC53 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpne8Q9DC53 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Cpne8Q9DC53 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.16□□□□□ -0.3
Cpne8Q9DC53 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpne8Q9DC53 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpne8Q9DC53 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpne8Q9DC53 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpne8Q9DC53 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cpne8Q9DC53 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cpne8Q9DC53 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpne8Q9DC53 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cpne8Q9DC53 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cpne8Q9DC53 Gm11424-201ENSMUST00000121929 829 ntBASIC13.16□□□□□ -0.3
Cpne8Q9DC53 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.16□□□□□ -0.3
Cpne8Q9DC53 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cpne8Q9DC53 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.16□□□□□ -0.3
Cpne8Q9DC53 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.16□□□□□ -0.3
Cpne8Q9DC53 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.16□□□□□ -0.3
Cpne8Q9DC53 Gm29649-201ENSMUST00000185649 419 ntBASIC13.16□□□□□ -0.3
Cpne8Q9DC53 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.16□□□□□ -0.3
Cpne8Q9DC53 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpne8Q9DC53 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpne8Q9DC53 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpne8Q9DC53 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpne8Q9DC53 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpne8Q9DC53 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.16□□□□□ -0.3
Cpne8Q9DC53 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cpne8Q9DC53 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpne8Q9DC53 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cpne8Q9DC53 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpne8Q9DC53 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Cpne8Q9DC53 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.16□□□□□ -0.3
Cpne8Q9DC53 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC13.16□□□□□ -0.3
Cpne8Q9DC53 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.16□□□□□ -0.3
Cpne8Q9DC53 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpne8Q9DC53 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cpne8Q9DC53 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpne8Q9DC53 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpne8Q9DC53 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpne8Q9DC53 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpne8Q9DC53 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpne8Q9DC53 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cpne8Q9DC53 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cpne8Q9DC53 Gm5053-201ENSMUST00000208361 1678 ntBASIC13.15□□□□□ -0.3
Cpne8Q9DC53 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpne8Q9DC53 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpne8Q9DC53 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cpne8Q9DC53 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Cpne8Q9DC53 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpne8Q9DC53 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpne8Q9DC53 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpne8Q9DC53 Gm11964-201ENSMUST00000120982 444 ntBASIC13.15□□□□□ -0.3
Cpne8Q9DC53 Gm1335-201ENSMUST00000121653 386 ntBASIC13.15□□□□□ -0.3
Cpne8Q9DC53 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.15□□□□□ -0.3
Cpne8Q9DC53 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Cpne8Q9DC53 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
Cpne8Q9DC53 Gm10268-201ENSMUST00000085340 555 ntBASIC13.15□□□□□ -0.3
Cpne8Q9DC53 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpne8Q9DC53 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.15□□□□□ -0.3
Cpne8Q9DC53 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cpne8Q9DC53 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cpne8Q9DC53 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cpne8Q9DC53 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpne8Q9DC53 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cpne8Q9DC53 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Cpne8Q9DC53 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpne8Q9DC53 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpne8Q9DC53 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cpne8Q9DC53 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cpne8Q9DC53 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cpne8Q9DC53 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cpne8Q9DC53 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cpne8Q9DC53 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
Cpne8Q9DC53 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cpne8Q9DC53 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms