Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
U2af1Q9D883 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
U2af1Q9D883 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
U2af1Q9D883 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
U2af1Q9D883 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
U2af1Q9D883 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
U2af1Q9D883 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC16.62■□□□□ 0.25
U2af1Q9D883 Gm14726-201ENSMUST00000120623 896 ntBASIC16.62■□□□□ 0.25
U2af1Q9D883 Gm14381-201ENSMUST00000122105 414 ntBASIC16.62■□□□□ 0.25
U2af1Q9D883 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
U2af1Q9D883 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
U2af1Q9D883 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
U2af1Q9D883 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
U2af1Q9D883 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
U2af1Q9D883 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
U2af1Q9D883 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
U2af1Q9D883 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
U2af1Q9D883 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
U2af1Q9D883 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
U2af1Q9D883 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
U2af1Q9D883 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
U2af1Q9D883 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC16.62■□□□□ 0.25
U2af1Q9D883 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
U2af1Q9D883 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC16.62■□□□□ 0.25
U2af1Q9D883 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
U2af1Q9D883 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
U2af1Q9D883 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
U2af1Q9D883 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC16.61■□□□□ 0.25
U2af1Q9D883 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
U2af1Q9D883 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
U2af1Q9D883 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC16.61■□□□□ 0.25
U2af1Q9D883 Gm37019-201ENSMUST00000192133 2134 ntBASIC16.61■□□□□ 0.25
U2af1Q9D883 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
U2af1Q9D883 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
U2af1Q9D883 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
U2af1Q9D883 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
U2af1Q9D883 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
U2af1Q9D883 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
U2af1Q9D883 Rmrp-201ENSMUST00000157463 271 ntBASIC16.61■□□□□ 0.25
U2af1Q9D883 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
U2af1Q9D883 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC16.61■□□□□ 0.25
U2af1Q9D883 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
U2af1Q9D883 AL732506.1-201ENSMUST00000226420 281 ntBASIC16.61■□□□□ 0.25
U2af1Q9D883 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
U2af1Q9D883 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
U2af1Q9D883 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
U2af1Q9D883 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
U2af1Q9D883 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
U2af1Q9D883 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
U2af1Q9D883 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
U2af1Q9D883 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
U2af1Q9D883 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
U2af1Q9D883 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
U2af1Q9D883 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
U2af1Q9D883 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
U2af1Q9D883 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
U2af1Q9D883 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
U2af1Q9D883 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
U2af1Q9D883 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC16.6■□□□□ 0.25
U2af1Q9D883 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
U2af1Q9D883 Gm23270-201ENSMUST00000104055 131 ntBASIC16.6■□□□□ 0.25
U2af1Q9D883 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC16.6■□□□□ 0.25
U2af1Q9D883 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
U2af1Q9D883 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
U2af1Q9D883 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
U2af1Q9D883 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
U2af1Q9D883 Ighv1-62-201ENSMUST00000193406 350 ntBASIC16.6■□□□□ 0.25
U2af1Q9D883 Gm39404-201ENSMUST00000216350 313 ntBASIC16.6■□□□□ 0.25
U2af1Q9D883 AC125209.1-201ENSMUST00000225812 766 ntBASIC16.6■□□□□ 0.25
U2af1Q9D883 AC113031.8-201ENSMUST00000227856 631 ntBASIC16.6■□□□□ 0.25
U2af1Q9D883 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
U2af1Q9D883 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
U2af1Q9D883 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
U2af1Q9D883 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
U2af1Q9D883 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
U2af1Q9D883 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
U2af1Q9D883 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
U2af1Q9D883 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC16.6■□□□□ 0.25
U2af1Q9D883 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
U2af1Q9D883 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
U2af1Q9D883 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
U2af1Q9D883 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
U2af1Q9D883 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
U2af1Q9D883 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
U2af1Q9D883 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
U2af1Q9D883 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC16.59■□□□□ 0.25
U2af1Q9D883 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
U2af1Q9D883 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
U2af1Q9D883 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
U2af1Q9D883 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
U2af1Q9D883 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
U2af1Q9D883 Gm14999-201ENSMUST00000121039 624 ntBASIC16.59■□□□□ 0.25
U2af1Q9D883 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
U2af1Q9D883 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
U2af1Q9D883 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
U2af1Q9D883 Gm31256-201ENSMUST00000194705 506 ntBASIC16.59■□□□□ 0.25
U2af1Q9D883 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC16.59■□□□□ 0.25
U2af1Q9D883 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
U2af1Q9D883 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
U2af1Q9D883 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms