Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps28Q9D1C8 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.99□□□□□ -0.33
Vps28Q9D1C8 Mospd4-201ENSMUST00000180618 576 ntBASIC12.99□□□□□ -0.33
Vps28Q9D1C8 Gm38158-201ENSMUST00000194617 339 ntBASIC12.99□□□□□ -0.33
Vps28Q9D1C8 Gm38266-201ENSMUST00000194931 421 ntBASIC12.99□□□□□ -0.33
Vps28Q9D1C8 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vps28Q9D1C8 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.99□□□□□ -0.33
Vps28Q9D1C8 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.99□□□□□ -0.33
Vps28Q9D1C8 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.99□□□□□ -0.33
Vps28Q9D1C8 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps28Q9D1C8 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps28Q9D1C8 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps28Q9D1C8 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Vps28Q9D1C8 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps28Q9D1C8 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps28Q9D1C8 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps28Q9D1C8 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps28Q9D1C8 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps28Q9D1C8 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps28Q9D1C8 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Vps28Q9D1C8 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
Vps28Q9D1C8 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.99□□□□□ -0.33
Vps28Q9D1C8 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps28Q9D1C8 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps28Q9D1C8 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps28Q9D1C8 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Vps28Q9D1C8 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps28Q9D1C8 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps28Q9D1C8 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps28Q9D1C8 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Vps28Q9D1C8 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.98□□□□□ -0.33
Vps28Q9D1C8 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps28Q9D1C8 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps28Q9D1C8 Rubie-203ENSMUST00000227803 2430 ntBASIC12.98□□□□□ -0.33
Vps28Q9D1C8 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps28Q9D1C8 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps28Q9D1C8 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps28Q9D1C8 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps28Q9D1C8 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps28Q9D1C8 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.98□□□□□ -0.33
Vps28Q9D1C8 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vps28Q9D1C8 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vps28Q9D1C8 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.98□□□□□ -0.33
Vps28Q9D1C8 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.98□□□□□ -0.33
Vps28Q9D1C8 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vps28Q9D1C8 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Vps28Q9D1C8 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vps28Q9D1C8 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps28Q9D1C8 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.98□□□□□ -0.33
Vps28Q9D1C8 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vps28Q9D1C8 Gm37489-201ENSMUST00000191883 159 ntBASIC12.98□□□□□ -0.33
Vps28Q9D1C8 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Vps28Q9D1C8 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.98□□□□□ -0.33
Vps28Q9D1C8 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vps28Q9D1C8 Gm45930-201ENSMUST00000221330 292 ntBASIC12.98□□□□□ -0.33
Vps28Q9D1C8 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps28Q9D1C8 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.98□□□□□ -0.33
Vps28Q9D1C8 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps28Q9D1C8 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps28Q9D1C8 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps28Q9D1C8 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps28Q9D1C8 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps28Q9D1C8 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps28Q9D1C8 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vps28Q9D1C8 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps28Q9D1C8 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps28Q9D1C8 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps28Q9D1C8 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps28Q9D1C8 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps28Q9D1C8 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps28Q9D1C8 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Vps28Q9D1C8 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps28Q9D1C8 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps28Q9D1C8 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps28Q9D1C8 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps28Q9D1C8 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps28Q9D1C8 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vps28Q9D1C8 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps28Q9D1C8 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.97□□□□□ -0.33
Vps28Q9D1C8 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps28Q9D1C8 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps28Q9D1C8 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps28Q9D1C8 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Vps28Q9D1C8 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.97□□□□□ -0.33
Vps28Q9D1C8 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps28Q9D1C8 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Vps28Q9D1C8 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vps28Q9D1C8 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps28Q9D1C8 Gm12241-201ENSMUST00000118330 726 ntBASIC12.97□□□□□ -0.33
Vps28Q9D1C8 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vps28Q9D1C8 Gm13813-201ENSMUST00000120998 787 ntBASIC12.97□□□□□ -0.33
Vps28Q9D1C8 Gm13786-201ENSMUST00000122371 333 ntBASIC12.97□□□□□ -0.33
Vps28Q9D1C8 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.97□□□□□ -0.33
Vps28Q9D1C8 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vps28Q9D1C8 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.97□□□□□ -0.33
Vps28Q9D1C8 Gm9368-201ENSMUST00000219348 831 ntBASIC12.97□□□□□ -0.33
Vps28Q9D1C8 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps28Q9D1C8 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps28Q9D1C8 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Vps28Q9D1C8 Gm24526-201ENSMUST00000082921 158 ntBASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms