Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Gm7783-201ENSMUST00000204795 781 ntBASIC12.04□□□□□ -0.48
Otud1Q9CUB6 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Otud1Q9CUB6 AC102542.1-201ENSMUST00000225204 1138 ntBASIC12.04□□□□□ -0.48
Otud1Q9CUB6 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Otud1Q9CUB6 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.04□□□□□ -0.48
Otud1Q9CUB6 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Otud1Q9CUB6 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Otud1Q9CUB6 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Otud1Q9CUB6 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Otud1Q9CUB6 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.04□□□□□ -0.48
Otud1Q9CUB6 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Otud1Q9CUB6 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Otud1Q9CUB6 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Otud1Q9CUB6 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.04□□□□□ -0.48
Otud1Q9CUB6 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Otud1Q9CUB6 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.04□□□□□ -0.48
Otud1Q9CUB6 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Otud1Q9CUB6 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Otud1Q9CUB6 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.04□□□□□ -0.48
Otud1Q9CUB6 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Otud1Q9CUB6 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Otud1Q9CUB6 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Otud1Q9CUB6 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Otud1Q9CUB6 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Gm44387-201ENSMUST00000196298 145 ntBASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Gm3961-201ENSMUST00000204425 994 ntBASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Otud1Q9CUB6 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Otud1Q9CUB6 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Otud1Q9CUB6 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Otud1Q9CUB6 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Otud1Q9CUB6 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Otud1Q9CUB6 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.02□□□□□ -0.48
Otud1Q9CUB6 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Otud1Q9CUB6 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.48
Otud1Q9CUB6 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Otud1Q9CUB6 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Otud1Q9CUB6 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Otud1Q9CUB6 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Otud1Q9CUB6 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.02□□□□□ -0.49
Otud1Q9CUB6 Gm13492-201ENSMUST00000119772 665 ntBASIC12.02□□□□□ -0.49
Otud1Q9CUB6 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Otud1Q9CUB6 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Otud1Q9CUB6 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.02□□□□□ -0.49
Otud1Q9CUB6 Speer4f2-201ENSMUST00000166086 1278 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Otud1Q9CUB6 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.02□□□□□ -0.49
Otud1Q9CUB6 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Otud1Q9CUB6 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Otud1Q9CUB6 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Otud1Q9CUB6 Gm37002-201ENSMUST00000194560 373 ntBASIC12.02□□□□□ -0.49
Otud1Q9CUB6 Gm19080-201ENSMUST00000196082 550 ntBASIC12.02□□□□□ -0.49
Otud1Q9CUB6 Gm44364-201ENSMUST00000198368 141 ntBASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms