Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Gm24891-201ENSMUST00000104391 136 ntBASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Gm11340-201ENSMUST00000119226 412 ntBASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Gm15573-201ENSMUST00000119487 540 ntBASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Gm18893-201ENSMUST00000198416 943 ntBASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 AC124457.1-201ENSMUST00000198845 120 ntBASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Mir7686-201ENSMUST00000200604 57 ntBASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Gm45398-201ENSMUST00000210561 165 ntBASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Gm19994-201ENSMUST00000217086 586 ntBASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cldnd1Q9CQX5 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Cldnd1Q9CQX5 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.35
Cldnd1Q9CQX5 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.89□□□□□ -0.35
Cldnd1Q9CQX5 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cldnd1Q9CQX5 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cldnd1Q9CQX5 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cldnd1Q9CQX5 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.89□□□□□ -0.35
Cldnd1Q9CQX5 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cldnd1Q9CQX5 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Cldnd1Q9CQX5 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Cldnd1Q9CQX5 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cldnd1Q9CQX5 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.89□□□□□ -0.35
Cldnd1Q9CQX5 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cldnd1Q9CQX5 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cldnd1Q9CQX5 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cldnd1Q9CQX5 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cldnd1Q9CQX5 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cldnd1Q9CQX5 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Cldnd1Q9CQX5 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC12.89□□□□□ -0.35
Cldnd1Q9CQX5 Gm10774-201ENSMUST00000188689 204 ntBASIC12.89□□□□□ -0.35
Cldnd1Q9CQX5 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC12.89□□□□□ -0.35
Cldnd1Q9CQX5 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cldnd1Q9CQX5 Gm9463-201ENSMUST00000206707 601 ntBASIC12.89□□□□□ -0.35
Cldnd1Q9CQX5 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.89□□□□□ -0.35
Cldnd1Q9CQX5 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC12.89□□□□□ -0.35
Cldnd1Q9CQX5 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC12.89□□□□□ -0.35
Cldnd1Q9CQX5 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cldnd1Q9CQX5 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Cldnd1Q9CQX5 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Cldnd1Q9CQX5 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cldnd1Q9CQX5 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cldnd1Q9CQX5 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.89□□□□□ -0.35
Cldnd1Q9CQX5 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cldnd1Q9CQX5 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cldnd1Q9CQX5 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.89□□□□□ -0.35
Cldnd1Q9CQX5 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cldnd1Q9CQX5 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.89□□□□□ -0.35
Cldnd1Q9CQX5 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cldnd1Q9CQX5 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cldnd1Q9CQX5 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cldnd1Q9CQX5 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.89□□□□□ -0.35
Cldnd1Q9CQX5 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cldnd1Q9CQX5 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cldnd1Q9CQX5 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cldnd1Q9CQX5 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Cldnd1Q9CQX5 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cldnd1Q9CQX5 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms