Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim34aQ99PP6 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim34aQ99PP6 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim34aQ99PP6 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim34aQ99PP6 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trim34aQ99PP6 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim34aQ99PP6 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim34aQ99PP6 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim34aQ99PP6 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim34aQ99PP6 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim34aQ99PP6 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim34aQ99PP6 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Trim34aQ99PP6 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Trim34aQ99PP6 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC15.57■□□□□ 0.08
Trim34aQ99PP6 Gm22334-201ENSMUST00000158070 133 ntBASIC15.57■□□□□ 0.08
Trim34aQ99PP6 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Trim34aQ99PP6 Gm42937-201ENSMUST00000197360 752 ntBASIC15.57■□□□□ 0.08
Trim34aQ99PP6 Gm44136-201ENSMUST00000203819 1106 ntBASIC15.57■□□□□ 0.08
Trim34aQ99PP6 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim34aQ99PP6 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC15.57■□□□□ 0.08
Trim34aQ99PP6 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim34aQ99PP6 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim34aQ99PP6 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim34aQ99PP6 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim34aQ99PP6 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim34aQ99PP6 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trim34aQ99PP6 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim34aQ99PP6 Gm5884-201ENSMUST00000036712 1479 ntBASIC15.57■□□□□ 0.08
Trim34aQ99PP6 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim34aQ99PP6 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim34aQ99PP6 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim34aQ99PP6 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trim34aQ99PP6 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim34aQ99PP6 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim34aQ99PP6 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim34aQ99PP6 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim34aQ99PP6 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim34aQ99PP6 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim34aQ99PP6 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.56■□□□□ 0.08
Trim34aQ99PP6 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Trim34aQ99PP6 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim34aQ99PP6 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim34aQ99PP6 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim34aQ99PP6 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim34aQ99PP6 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim34aQ99PP6 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim34aQ99PP6 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim34aQ99PP6 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim34aQ99PP6 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC15.56■□□□□ 0.08
Trim34aQ99PP6 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC15.56■□□□□ 0.08
Trim34aQ99PP6 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC15.56■□□□□ 0.08
Trim34aQ99PP6 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim34aQ99PP6 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim34aQ99PP6 Gm13394-201ENSMUST00000121658 1000 ntBASIC15.56■□□□□ 0.08
Trim34aQ99PP6 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC15.56■□□□□ 0.08
Trim34aQ99PP6 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC15.56■□□□□ 0.08
Trim34aQ99PP6 Gm20426-201ENSMUST00000173657 440 ntBASIC15.56■□□□□ 0.08
Trim34aQ99PP6 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC15.56■□□□□ 0.08
Trim34aQ99PP6 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim34aQ99PP6 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC15.56■□□□□ 0.08
Trim34aQ99PP6 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim34aQ99PP6 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim34aQ99PP6 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim34aQ99PP6 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trim34aQ99PP6 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC15.56■□□□□ 0.08
Trim34aQ99PP6 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim34aQ99PP6 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim34aQ99PP6 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim34aQ99PP6 Gm30238-201ENSMUST00000195528 2603 ntBASIC15.56■□□□□ 0.08
Trim34aQ99PP6 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC15.56■□□□□ 0.08
Trim34aQ99PP6 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trim34aQ99PP6 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim34aQ99PP6 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim34aQ99PP6 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim34aQ99PP6 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim34aQ99PP6 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim34aQ99PP6 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim34aQ99PP6 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim34aQ99PP6 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim34aQ99PP6 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim34aQ99PP6 Gm18626-201ENSMUST00000221512 1409 ntBASIC15.55■□□□□ 0.08
Trim34aQ99PP6 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim34aQ99PP6 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim34aQ99PP6 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim34aQ99PP6 Gm5638-201ENSMUST00000118618 1258 ntBASIC15.55■□□□□ 0.08
Trim34aQ99PP6 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trim34aQ99PP6 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC15.55■□□□□ 0.08
Trim34aQ99PP6 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC15.55■□□□□ 0.08
Trim34aQ99PP6 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC15.55■□□□□ 0.08
Trim34aQ99PP6 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Trim34aQ99PP6 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim34aQ99PP6 AC163667.3-201ENSMUST00000225774 222 ntBASIC15.55■□□□□ 0.08
Trim34aQ99PP6 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim34aQ99PP6 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim34aQ99PP6 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim34aQ99PP6 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim34aQ99PP6 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim34aQ99PP6 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim34aQ99PP6 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim34aQ99PP6 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms