Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gtf2ird2Q99NI3 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gtf2ird2Q99NI3 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gtf2ird2Q99NI3 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gtf2ird2Q99NI3 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gtf2ird2Q99NI3 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gtf2ird2Q99NI3 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gtf2ird2Q99NI3 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Gtf2ird2Q99NI3 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gtf2ird2Q99NI3 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Gtf2ird2Q99NI3 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gtf2ird2Q99NI3 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gtf2ird2Q99NI3 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gtf2ird2Q99NI3 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.03□□□□□ -0.32
Gtf2ird2Q99NI3 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Gtf2ird2Q99NI3 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Gtf2ird2Q99NI3 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Gtf2ird2Q99NI3 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Gtf2ird2Q99NI3 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Gtf2ird2Q99NI3 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Gtf2ird2Q99NI3 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.03□□□□□ -0.32
Gtf2ird2Q99NI3 Gm13342-201ENSMUST00000121055 207 ntBASIC13.03□□□□□ -0.32
Gtf2ird2Q99NI3 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Gtf2ird2Q99NI3 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Gtf2ird2Q99NI3 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Gtf2ird2Q99NI3 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Gtf2ird2Q99NI3 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Gtf2ird2Q99NI3 Mir8109-201ENSMUST00000184375 117 ntBASIC13.03□□□□□ -0.32
Gtf2ird2Q99NI3 Gm8227-201ENSMUST00000223306 571 ntBASIC13.03□□□□□ -0.32
Gtf2ird2Q99NI3 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gtf2ird2Q99NI3 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Gtf2ird2Q99NI3 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Gtf2ird2Q99NI3 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.03□□□□□ -0.32
Gtf2ird2Q99NI3 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Gtf2ird2Q99NI3 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gtf2ird2Q99NI3 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gtf2ird2Q99NI3 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gtf2ird2Q99NI3 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gtf2ird2Q99NI3 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gtf2ird2Q99NI3 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gtf2ird2Q99NI3 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gtf2ird2Q99NI3 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gtf2ird2Q99NI3 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
Gtf2ird2Q99NI3 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Gtf2ird2Q99NI3 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gtf2ird2Q99NI3 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Gtf2ird2Q99NI3 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gtf2ird2Q99NI3 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gtf2ird2Q99NI3 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Gtf2ird2Q99NI3 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gtf2ird2Q99NI3 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Gtf2ird2Q99NI3 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gtf2ird2Q99NI3 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gtf2ird2Q99NI3 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gtf2ird2Q99NI3 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2ird2Q99NI3 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2ird2Q99NI3 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Gtf2ird2Q99NI3 Gm15370-201ENSMUST00000117158 253 ntBASIC13.02□□□□□ -0.33
Gtf2ird2Q99NI3 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.02□□□□□ -0.33
Gtf2ird2Q99NI3 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2ird2Q99NI3 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC13.02□□□□□ -0.33
Gtf2ird2Q99NI3 Gm44364-201ENSMUST00000198368 141 ntBASIC13.02□□□□□ -0.33
Gtf2ird2Q99NI3 Gm43822-201ENSMUST00000200285 476 ntBASIC13.02□□□□□ -0.33
Gtf2ird2Q99NI3 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC13.02□□□□□ -0.33
Gtf2ird2Q99NI3 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.02□□□□□ -0.33
Gtf2ird2Q99NI3 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2ird2Q99NI3 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2ird2Q99NI3 Cts7-204ENSMUST00000225321 1257 ntBASIC13.02□□□□□ -0.33
Gtf2ird2Q99NI3 Morn2-202ENSMUST00000227729 656 ntBASIC13.02□□□□□ -0.33
Gtf2ird2Q99NI3 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC13.02□□□□□ -0.33
Gtf2ird2Q99NI3 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2ird2Q99NI3 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Gtf2ird2Q99NI3 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2ird2Q99NI3 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2ird2Q99NI3 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2ird2Q99NI3 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2ird2Q99NI3 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2ird2Q99NI3 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2ird2Q99NI3 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2ird2Q99NI3 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2ird2Q99NI3 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.02□□□□□ -0.33
Gtf2ird2Q99NI3 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2ird2Q99NI3 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2ird2Q99NI3 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2ird2Q99NI3 Rubie-203ENSMUST00000227803 2430 ntBASIC13.02□□□□□ -0.33
Gtf2ird2Q99NI3 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2ird2Q99NI3 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2ird2Q99NI3 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2ird2Q99NI3 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2ird2Q99NI3 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2ird2Q99NI3 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2ird2Q99NI3 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2ird2Q99NI3 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2ird2Q99NI3 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2ird2Q99NI3 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.01□□□□□ -0.33
Gtf2ird2Q99NI3 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.01□□□□□ -0.33
Gtf2ird2Q99NI3 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gtf2ird2Q99NI3 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.01□□□□□ -0.33
Gtf2ird2Q99NI3 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Gtf2ird2Q99NI3 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 132.1 ms