Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.45□□□□□ -0.26
Pcdha9Q91Y11 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdha9Q91Y11 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.45□□□□□ -0.26
Pcdha9Q91Y11 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.45□□□□□ -0.26
Pcdha9Q91Y11 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Pcdha9Q91Y11 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdha9Q91Y11 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdha9Q91Y11 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdha9Q91Y11 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdha9Q91Y11 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdha9Q91Y11 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdha9Q91Y11 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdha9Q91Y11 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Pcdha9Q91Y11 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdha9Q91Y11 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdha9Q91Y11 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdha9Q91Y11 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdha9Q91Y11 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdha9Q91Y11 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdha9Q91Y11 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdha9Q91Y11 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdha9Q91Y11 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.44□□□□□ -0.26
Pcdha9Q91Y11 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Pcdha9Q91Y11 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdha9Q91Y11 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Pcdha9Q91Y11 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Pcdha9Q91Y11 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdha9Q91Y11 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Pcdha9Q91Y11 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdha9Q91Y11 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdha9Q91Y11 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
Pcdha9Q91Y11 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdha9Q91Y11 Gm9630-201ENSMUST00000178304 885 ntBASIC13.44□□□□□ -0.26
Pcdha9Q91Y11 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdha9Q91Y11 Gm6013-201ENSMUST00000212264 699 ntBASIC13.44□□□□□ -0.26
Pcdha9Q91Y11 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.44□□□□□ -0.26
Pcdha9Q91Y11 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Pcdha9Q91Y11 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.44□□□□□ -0.26
Pcdha9Q91Y11 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.44□□□□□ -0.26
Pcdha9Q91Y11 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdha9Q91Y11 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdha9Q91Y11 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdha9Q91Y11 Gm9823-201ENSMUST00000051212 327 ntBASIC13.44□□□□□ -0.26
Pcdha9Q91Y11 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdha9Q91Y11 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdha9Q91Y11 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdha9Q91Y11 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Pcdha9Q91Y11 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdha9Q91Y11 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdha9Q91Y11 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Pcdha9Q91Y11 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdha9Q91Y11 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.44□□□□□ -0.26
Pcdha9Q91Y11 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdha9Q91Y11 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdha9Q91Y11 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdha9Q91Y11 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Pcdha9Q91Y11 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdha9Q91Y11 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.44□□□□□ -0.26
Pcdha9Q91Y11 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdha9Q91Y11 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdha9Q91Y11 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Pcdha9Q91Y11 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdha9Q91Y11 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
Pcdha9Q91Y11 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdha9Q91Y11 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdha9Q91Y11 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
Pcdha9Q91Y11 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdha9Q91Y11 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdha9Q91Y11 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdha9Q91Y11 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdha9Q91Y11 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdha9Q91Y11 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdha9Q91Y11 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdha9Q91Y11 Gm12058-201ENSMUST00000118614 437 ntBASIC13.43□□□□□ -0.26
Pcdha9Q91Y11 Gm13315-201ENSMUST00000120376 991 ntBASIC13.43□□□□□ -0.26
Pcdha9Q91Y11 Gm11597-201ENSMUST00000121423 964 ntBASIC13.43□□□□□ -0.26
Pcdha9Q91Y11 Gm13786-201ENSMUST00000122371 333 ntBASIC13.43□□□□□ -0.26
Pcdha9Q91Y11 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdha9Q91Y11 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.43□□□□□ -0.26
Pcdha9Q91Y11 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.43□□□□□ -0.26
Pcdha9Q91Y11 Gm42693-201ENSMUST00000196779 631 ntBASIC13.43□□□□□ -0.26
Pcdha9Q91Y11 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdha9Q91Y11 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.43□□□□□ -0.26
Pcdha9Q91Y11 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.43□□□□□ -0.26
Pcdha9Q91Y11 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.43□□□□□ -0.26
Pcdha9Q91Y11 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdha9Q91Y11 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdha9Q91Y11 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Pcdha9Q91Y11 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdha9Q91Y11 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.43□□□□□ -0.26
Pcdha9Q91Y11 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdha9Q91Y11 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdha9Q91Y11 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdha9Q91Y11 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.43□□□□□ -0.26
Pcdha9Q91Y11 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdha9Q91Y11 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Pcdha9Q91Y11 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdha9Q91Y11 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdha9Q91Y11 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdha9Q91Y11 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms